PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA01G36110.2

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

CPP

Protein Properties

Length: 620aa MW: 66946.1 Da PI: 8.9805

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA01G36110.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	40.9	4.1e-13	158	196	2	41
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 +kk CnCk+skClk+YCeCfa+g++C+ C+C++C+N+ + ONIVA01G36110.2 158 KKKCCNCKHSKCLKLYCECFASGVYCDG-CNCSNCFNNVK 196 799***********************.******987 PP
2	TCR	50.8	3.3e-16	242	281	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 k++kgC+Ckks ClkkYCeCf+a+ Cse+CkC dCkN e ONIVA01G36110.2 242 KHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFE 281 589***********************************65 PP

Sequence ? help Back to Top
Protein Sequence Length: 620 aa Download sequence
MAGKEQQGGG GPPPPPRAPV PAASSQPPIK KLVRQLDFTS AALAGNPAMA AAAAAVSRAL 60 QPRAVPVGFP QPQQLRAHLP VGVPQQLHPR GLPVMRSHHV VHVPLPRPAV AVAVPVPQVR 120 PAQPQPVPRP PVAVPLKPES PKPPRARLYE GKDGTPTKKK CCNCKHSKCL KLYCECFASG 180 VYCDGCNCSN CFNNVKNETA RREAIDATLE RNPDAFRPKI GSSPHANRNN MEAAGDLPLV 240 GKHNKGCHCK KSGCLKKYCE CFQANILCSE NCKCMDCKNF EGSEERKALF QGDHKNSIHM 300 QQAANAAVNG AIGAAAFSSP STSRKRKHID PSLDHSAKEN GAHRTNHVPQ KNGMPSDGPL 360 PINQPVHPPT LGPFKVTYRP LLADIVQPGD VKELCKLLVV VSGNAAKAYA GKKSQEDKVV 420 EKEDEMGGKR EGEIGGSLAS TNHDREENNK DPNNQKASAD DPSTGGTRAG KASLEESKHD 480 CNDDQKSNRP MSPGTLALMC DEQDTMFMTS QNVVPQQPAP VNQNQSELYA EQERCVLTEF 540 RDCLHKLVTF GRMKEEKFSM AIKSEVPAHP MQANGVSRIP YSKEVDVPVV KTFLQSSSRH 600 PAAGNSATGH LDKKPKHENT

Sequence ? help Back to Top

Protein Sequence Length: 620 aa Download sequence

MAGKEQQGGG GPPPPPRAPV PAASSQPPIK KLVRQLDFTS AALAGNPAMA AAAAAVSRAL  60
QPRAVPVGFP QPQQLRAHLP VGVPQQLHPR GLPVMRSHHV VHVPLPRPAV AVAVPVPQVR  120
PAQPQPVPRP PVAVPLKPES PKPPRARLYE GKDGTPTKKK CCNCKHSKCL KLYCECFASG  180
VYCDGCNCSN CFNNVKNETA RREAIDATLE RNPDAFRPKI GSSPHANRNN MEAAGDLPLV  240
GKHNKGCHCK KSGCLKKYCE CFQANILCSE NCKCMDCKNF EGSEERKALF QGDHKNSIHM  300
QQAANAAVNG AIGAAAFSSP STSRKRKHID PSLDHSAKEN GAHRTNHVPQ KNGMPSDGPL  360
PINQPVHPPT LGPFKVTYRP LLADIVQPGD VKELCKLLVV VSGNAAKAYA GKKSQEDKVV  420
EKEDEMGGKR EGEIGGSLAS TNHDREENNK DPNNQKASAD DPSTGGTRAG KASLEESKHD  480
CNDDQKSNRP MSPGTLALMC DEQDTMFMTS QNVVPQQPAP VNQNQSELYA EQERCVLTEF  540
RDCLHKLVTF GRMKEEKFSM AIKSEVPAHP MQANGVSRIP YSKEVDVPVV KTFLQSSSRH  600
PAAGNSATGH LDKKPKHENT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	1e-122	CPP family protein

Link Out ? help Back to Top
Ensembl	ONIVA01G36110.2