PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA01G36080.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family HD-ZIP
Protein Properties Length: 816aa    MW: 88598.7 Da    PI: 6.8048
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA01G36080.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox642.1e-2096151156
                      TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
         Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                      r++ +++t+eq++++e+lF+++++p++++r++ +k+lgL+ rqVk+WFqNrR++ k
  ONIVA01G36080.1  96 RKNYHRHTAEQIRIMEALFKESPHPDERQRQQVSKQLGLSARQVKFWFQNRRTQIK 151
                      788999**********************************************9877 PP
2START174.65.9e-553125382206
                      HHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS.........SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EE CS
            START   2 laeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv........dsgealrasgvvdmvlallveellddkeqWdetla....ka 79 
                      la +a++elv + +++ep+Wv+ +    +++n+de+++ f ++++         ++ea+r++g+v  ++++lv +++d+  +W+  ++    ka
  ONIVA01G36080.1 312 LATRALDELVGMCSSGEPVWVRGVetgrDILNYDEYVRLFRRDHGgsgdqmagWTVEASRECGLVYLDTMQLVHTFMDVD-KWKDLFPtmisKA 404
                      78899*************************************999***********************************.99998888888** PP

                      EEEEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEE CS
            START  80 etlevissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtw 166
                      +tle is+       g+lqlm+aelq l+p+vp R+ +f+Ry+++l a++w+ivdvS d+ +     ss vR+ + pSg+lie+  ng++k+tw
  ONIVA01G36080.1 405 ATLEMISNReddgrdGVLQLMYAELQTLTPMVPtRELYFARYCKKLAAERWAIVDVSFDESETGVHASSAVRCWKNPSGCLIEEQNNGRCKMTW 498
                      *******99999***********************************************9999998**************************** PP

                      EE-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
            START 167 vehvdlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                      veh+ ++  ++  l+r +  sg+a+ga++wva+lq qce+
  ONIVA01G36080.1 499 VEHTRCRRCTVAPLYRAVTASGVAFGARRWVAALQLQCER 538
                      **************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 816 aa     Download sequence    
MGTNRPRPRT KNFFAAPALS LTLAGVFGRK NGPAASGGDG VEEGDEEVQA AGEAAVEISS  60
ENAGPGCSQS QSGGGSGEDG GHDDDDGEGS NKKRRRKNYH RHTAEQIRIM EALFKESPHP  120
DERQRQQVSK QLGLSARQVK FWFQNRRTQI KAVQERHENS LLKSELEKLQ DEHRAMRELA  180
KKPSRCLNCG VVATSSDAAA AATAADTREQ RLRLENAKLK AEVCMPPPRS RARPFRCATL  240
QDTDSGELAM LNLFQIERLR GTPGKSAADG VASPPCSASA GAMQTNSRSP PLHDHDGGFL  300
RHDDDKPRIL ELATRALDEL VGMCSSGEPV WVRGVETGRD ILNYDEYVRL FRRDHGGSGD  360
QMAGWTVEAS RECGLVYLDT MQLVHTFMDV DKWKDLFPTM ISKAATLEMI SNREDDGRDG  420
VLQLMYAELQ TLTPMVPTRE LYFARYCKKL AAERWAIVDV SFDESETGVH ASSAVRCWKN  480
PSGCLIEEQN NGRCKMTWVE HTRCRRCTVA PLYRAVTASG VAFGARRWVA ALQLQCERMV  540
FAVATNIPTR DSTGVSTLAG RRSVLKLAHR MTSSLCRTTG GSRDMAWRRA PKGGSGGGGD  600
DDIWLTSREN AGDDPGEPQG LIACAAASTW LPVNPTALLD LLRDESRRPE WDVMLPGKSV  660
QSRVNLAKGK DRTNCVTAYA ARPEEEEERG GKWVLQDVCT NPCESTIAYA AIDAAALQPV  720
IAGHDSSGVH LLPCGFISVM PDGLESKPAV ITASRRGGEA SGAGSLVTVA FQVPASPSAA  780
AATLSPDSVE AVTVLVSSTL RNIRKALGCD SCEEEF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
19198NKKRRRKN
29297KKRRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79840.10.0HD-ZIP family protein