PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA01G35550.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | ERF | ||||||||
Protein Properties | Length: 212aa MW: 21145.8 Da PI: 11.0784 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65 | 1.5e-20 | 126 | 177 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 +y+GVr+++ +g+++AeIrdp+ g +r +lg+fgtaeeAa+a+++a+ +++g+ ONIVA01G35550.1 126 HYRGVRRRP-WGKYAAEIRDPTRHG--ARLWLGTFGTAEEAAAAYDRAAFRMRGA 177 7********.**********96544..**************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 212 aa Download sequence |
MSLSLGFSAG AGAGADRLAA APALQAAGAL PPRVDVSLSL ARAANGQPSS YLPLNENDSL 60 DMVLFDVLRE ASAVAALSSS SSSSPELGAR TTAPVVAGHP AGRKGGGGGG GGRGAAARGG 120 AAGGRHYRGV RRRPWGKYAA EIRDPTRHGA RLWLGTFGTA EEAAAAYDRA AFRMRGAKAL 180 LNFPPAVPGD GARRGAAAAA KQVGMSDGEC VI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 104 | 113 | KGGGGGGGGR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G47220.1 | 4e-12 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA01G35550.1 |