PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA01G35310.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family WRKY
Protein Properties Length: 316aa    MW: 34257.6 Da    PI: 4.5569
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA01G35310.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.24.5e-3098156259
                      --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                      +D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp+v+ +tY+ eHnh+
  ONIVA01G35310.1  98 SDSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRADPTVLLVTYSFEHNHP 156
                      69*************************998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MAAGEEVMDR STSAEDGYCS AGTDSPRAES VDEQGAAEES SPRGGQKREL PSPSASPSSP  60
LPPAAKRSRR SVEKRVVSVP IAECGDRPKG AGEGPPPSDS WAWRKYGQKP IKGSPYPRGY  120
YRCSSSKGCP ARKQVERSRA DPTVLLVTYS FEHNHPWPQP KSSSCHASKS SPRSTAPKPE  180
PAADGQQPEP AENESSASAE LEVPEPEPEQ ESEPVVKQEE EQKEEQKAVV EPAAVTTTVA  240
PAPAVEEEDE NFDFGWIDQY HPTWHRSYAP LLPPEEWERE LQGDDALFAG LGELPECAVV  300
FGRRRELGLA ATAPCS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29280.12e-38WRKY family protein