PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA01G33710.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family MIKC_MADS
Protein Properties Length: 196aa    MW: 22531.8 Da    PI: 8.2045
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA01G33710.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF70.41.6e-22958150
                     S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
           SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                     krien ++rq tf kRr g++KKA EL vLCda+ ++++fs +gkly + 
  ONIVA01G33710.1  9 KRIENPTQRQSTFYKRRDGLFKKARELAVLCDADLLLLLFSASGKLYHFL 58
                     79*********************************************996 PP

2K-box33.22.2e-1272170199
            K-box   1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaL 94 
                      y++++++++++   ++ + el+k+ +  + L++++R +  +d e+ ++  L+ Le++Le +++k+Rs K++ +  +i +lq+  +  qee   L
  ONIVA01G33710.1  72 YEATTHTKVWADIRQERRAELEKVGSMCDLLEKQLRFMTVDDGEEYTVPSLEALEHNLEAAMRKVRSEKDRKIGGEICYLQNIIRGRQEERYGL 165
                      566778889*************************************************************************999999999999 PP

            K-box  95 rkkle 99 
                        k++
  ONIVA01G33710.1 166 CDKIA 170
                      88875 PP

Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
MGRGRSEIKR IENPTQRQST FYKRRDGLFK KARELAVLCD ADLLLLLFSA SGKLYHFLSP  60
TVPSVREFVE RYEATTHTKV WADIRQERRA ELEKVGSMCD LLEKQLRFMT VDDGEEYTVP  120
SLEALEHNLE AAMRKVRSEK DRKIGGEICY LQNIIRGRQE ERYGLCDKIA HAQTLKDVEC  180
GSTSLSNGLD LKLGFN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60910.12e-23MIKC_MADS family protein