PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA01G30330.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family E2F/DP
Protein Properties Length: 254aa    MW: 28088.2 Da    PI: 10.4262
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA01G30330.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP63.82.4e-20741381871
          E2F_TDP  18 eksee.givtlnevakeLvse...........dvknkrRRiYDilNVLealnliekkekneirwkg 71 
                      +k+e+ g++t+neva+e+ +e           d+kn+rRR+YD++NVL a+++i+k +k+ei+w+g
  ONIVA01G30330.1  74 KKVEAkGRTTYNEVADEIFAElksitqnglefDEKNIRRRVYDAFNVLIAIRVIAK-DKKEIKWMG 138
                      456666**************************************************.*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MAPPCGDAAA AASAAPGLAN LLIREGAGLP SRPERGGGGG GGNAAEREEG GANRNGKKEK  60
AGAQRITGWG LLSKKVEAKG RTTYNEVADE IFAELKSITQ NGLEFDEKNI RRRVYDAFNV  120
LIAIRVIAKD KKEIKWMGLT NYRYEKIQKL EEVHKELITR IKNKKKLLQE IEKQNITLRN  180
QASQRPAESV NGILLPFLLI KTSRKARVEI EISEDSKFAR FDFNGAPFTM HDDVSILEAI  240
RRNNKGRAGL SIHP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03415.22e-50E2F/DP family protein