PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA01G29960.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 266aa    MW: 29029.5 Da    PI: 8.395
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA01G29960.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.58.2e-193989155
              AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     s++ GVr+++ +grWvAeI+d +   ++ r +lg+f taeeAa+a+++a+  l+g
  ONIVA01G29960.1 39 SKFVGVRQRP-SGRWVAEIKDTT---QKIRMWLGTFETAEEAARAYDEAACLLRG 89
                     79********.7*********32...35**********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MELQFQKPTQ GQSQQQQCHY QVPTVTVAKN KAKTKCSSSK FVGVRQRPSG RWVAEIKDTT  60
QKIRMWLGTF ETAEEAARAY DEAACLLRGS NTRTNFATQA APDSPLASRI RTLLTHKKLK  120
KSMPQPTITF STAVYHHARS TVPAAATSTS TSGVSPSRSN SSSLNFATNL SNFAMSGGEE  180
LQLASSQQQY DQSWALNTSL LPIGDGCDMS GSNACPVASD QDKMKAEKQG SHGMNGIQEQ  240
ETFDMGNDLC DSLWDLPPIC QLSCKY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.11e-27ERF family protein