PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA01G29690.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

NAC

Protein Properties

Length: 293aa MW: 31481 Da PI: 9.3666

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA01G29690.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	76.2	7.5e-24	18	143	8	126
NAM 8 hPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k....kvkaeekewyfFskrdkkyatgkrknratk.sgyWkatgkdkevlsk 95 hPtd+elv++yL+++v++ ++ + ++e+d+y ++P dL k ++ +++ wyfF++ ++k++ g+r+ ra+ g W++ k+v+ ONIVA01G29690.1 18 HPTDQELVTKYLRRHVDSGGNPW-RYVHEADVYAADPDDLTgKyspaVASDGSRAWYFFTTVRSKSTGGQRRARAVGdGGCWHSEAGAKDVVGG 110 9*****************999.88**********84366644444777****************65538999999999986 PP NAM 96 ..kgelvglkktLvfykgrapkgektdWvmhey 126 + + +g ++ + f +++ p+ +++ W+m e ONIVA01G29690.1 111 irSPRPIGRRQFFSFVNKEGPRRVRSGWIMVEI 143 656777***********************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 293 aa Download sequence
MSPSRPDEAD PAADFGSHPT DQELVTKYLR RHVDSGGNPW RYVHEADVYA ADPDDLTGKY 60 SPAVASDGSR AWYFFTTVRS KSTGGQRRAR AVGDGGCWHS EAGAKDVVGG IRSPRPIGRR 120 QFFSFVNKEG PRRVRSGWIM VEIGLKYAQQ NASSDELVLC KVYRSPRAPP AAAAANKSMA 180 APPPTATKSK TEEATPPPDD VKPVVAAAQT PDTKILRAAK EAAAAAATGC KRKADVKSSG 240 ARRGKRLCSR CRAETSESDS ETAVLDRSPS IEDETADSSE IHGSSDGKFI RFL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04070.2	1e-15	NAC family protein

Link Out ? help Back to Top
Ensembl	ONIVA01G29690.1