PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA01G29490.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family NAC
Protein Properties Length: 350aa    MW: 37882.4 Da    PI: 9.2608
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA01G29490.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM101.51.2e-31702261128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......leleev.ikev.diykvePwdLpk...............kvkaeekewyfFskrdkkyatg 71 
                      lp+G++F+Ptd+el+ e+L+ k++ +       ++++   i+   +i++++P++Lp                +v ++    +fF++ +k+y+tg
  ONIVA01G29490.1  70 LPAGVKFDPTDQELL-EHLEGKARPDArklhplIDEFIPtIEGEnGICYTHPERLPGtsgrdvetigavrhgRVGKDGLIRHFFHRPSKAYTTG 162
                      799************.99****998885665443333333665557**********5589999988866544333333355************* PP

              NAM  72 krknratk......sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                      +rk+r+++      + +W++tgk+++v++ +g+l+g kk+Lv+y   g+++k+ekt+Wvmh+y+l
  ONIVA01G29490.1 163 TRKRRKVHtdeqggETRWHKTGKTRPVFT-GGKLKGYKKILVLYtnYGKQRKPEKTNWVMHQYHL 226
                      *****744456555778************.9*************6657999999*********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    
MTWCNSFNDV RAVENNLATA AAVAAAKKQQ QQQQQVSQHV NLIKTCPSCG HRAQYEQAAA  60
AATIQDLPGL PAGVKFDPTD QELLEHLEGK ARPDARKLHP LIDEFIPTIE GENGICYTHP  120
ERLPGTSGRD VETIGAVRHG RVGKDGLIRH FFHRPSKAYT TGTRKRRKVH TDEQGGETRW  180
HKTGKTRPVF TGGKLKGYKK ILVLYTNYGK QRKPEKTNWV MHQYHLGSDE EEKDGELVVS  240
KVFYQTQPRQ CGGGSAATAK DLSVDLVAGN NIKASNAAAE HHHNDGVGGG GHGGNNSSML  300
KEAAGIVDFY NPAAALIGYS QAAPNNRAAA SAHLTMPNFE VHTGGAGFGP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28500.11e-120NAC family protein