PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA01G29020.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

NAC

Protein Properties

Length: 402aa MW: 44628.9 Da PI: 6.6794

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA01G29020.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	60.5	5.4e-19	52	186	8	128
NAM 8 hPtdeelvveyLkkkvegkk......lelee...vikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknratk..sgyWk 84 hP+++el+ yL+++v + + + +i+e+d+y+++P dL + + +++++ wyfFs + +g rk r+++ +g W+ ONIVA01G29020.1 52 HPSEQELIETYLRPRVVSGDkpppssS---ScgfIIHEADVYSADPADLTRgfapavARSSGDEAWYFFSAVRGL--KGGRKARTVDdgAGCWH 140 9***********9877765766543...14437**********8557777544558889*98775..588999976644788 PP NAM 85 atgkdkevlsk.kgelvglkktLvfykg.rapkgektdWvmheyrl 128 + k+vl++ +g+ g ++++ f ++ ++ + +++ W+m e +l ONIVA01G29020.1 141 SEAGAKPVLAAsSGRRLGHRQSFSFITKdDDGQRVRSGWLMVELSL 186 9999999998868889********5436667789***99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 402 aa Download sequence
MGAASRPRRQ CRAPRRLDGG GGGSMDVHPS ELLPRSRCTA PRRLDDDEMD VHPSEQELIE 60 TYLRPRVVSG DKPPPSSSSC GFIIHEADVY SADPADLTRG FAPAVARSSG DEAWYFFSAV 120 RGLKGGRKAR TVDDGAGCWH SEAGAKPVLA ASSGRRLGHR QSFSFITKDD DGQRVRSGWL 180 MVELSLDVDE EEQLVLSKVY FSPRAPGAKK PTTAAAMSRH KRKLSTTDIA SPPRRQRRHR 240 VVPSSPPEEP NTSPSPAAAP PDQQEGGDDD PDRGSISWWL RRLFGLTATF TEEESIELNP 300 WLKDILRPFP PPLPPTPPPP CPSPRRKLID MPEIREFIMR GSYLGGGPAP PRYECDHPAM 360 VMTGGDDQQQ LDEQRRDDVG DDRAHYDRVD GQLQFERHYL QM

Sequence ? help Back to Top

Protein Sequence Length: 402 aa Download sequence

MGAASRPRRQ CRAPRRLDGG GGGSMDVHPS ELLPRSRCTA PRRLDDDEMD VHPSEQELIE  60
TYLRPRVVSG DKPPPSSSSC GFIIHEADVY SADPADLTRG FAPAVARSSG DEAWYFFSAV  120
RGLKGGRKAR TVDDGAGCWH SEAGAKPVLA ASSGRRLGHR QSFSFITKDD DGQRVRSGWL  180
MVELSLDVDE EEQLVLSKVY FSPRAPGAKK PTTAAAMSRH KRKLSTTDIA SPPRRQRRHR  240
VVPSSPPEEP NTSPSPAAAP PDQQEGGDDD PDRGSISWWL RRLFGLTATF TEEESIELNP  300
WLKDILRPFP PPLPPTPPPP CPSPRRKLID MPEIREFIMR GSYLGGGPAP PRYECDHPAM  360
VMTGGDDQQQ LDEQRRDDVG DDRAHYDRVD GQLQFERHYL QM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15510.1	1e-10	NAC family protein

Link Out ? help Back to Top
Ensembl	ONIVA01G29020.1