PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA01G28540.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | bZIP | ||||||||
Protein Properties | Length: 349aa MW: 37572.5 Da PI: 9.8047 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 66.7 | 4.1e-21 | 212 | 274 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +ke+krerrkq+NRe+ArrsR+RK+ae+eeL++kv+ L+aeN++L+ e+++l++ ++kl+ e+ ONIVA01G28540.1 212 DKESKRERRKQSNRESARRSRLRKQAETEELARKVELLTAENTSLRREISRLTESSKKLRLEN 274 689********************************************************9887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 349 aa Download sequence |
MGKAPSPPKD HPALSPYLDW SNMQAYYGPG ILPPTFFSPG IAAGHTPPPF IWGPQPLVPS 60 AFGKPYAAIY PPGGAFSHPF MPLMVSPLSM EPAKSVNSKD NCSNKKMKEI DGAAMSTGSG 120 NSEKTSGDCS LEGFSDGNNQ KASGTPKKRS IDDRPKSGVE TGGALTPNDR PSEQAALPNL 180 CIPVTAIKPD VSTASDFRVI ATPVTEVPTK DDKESKRERR KQSNRESARR SRLRKQAETE 240 ELARKVELLT AENTSLRREI SRLTESSKKL RLENSALMEK LTETGPDEAQ EVPPVKTKAQ 300 QARGVENFLS MIDKTGTPRS SGHMDHAIAT PKLRQLLGSG LATDAVAAR |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 229 | 235 | RRSRLRK |
2 | 229 | 236 | RRSRLRKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46270.1 | 2e-50 | bZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA01G28540.1 |