PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA01G28420.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | WRKY | ||||||||
Protein Properties | Length: 326aa MW: 34003.9 Da PI: 6.9107 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 84.1 | 1.4e-26 | 152 | 213 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 ldDg++WrKYGqK++ g+++pr+Y+rCt++ gC++ k+v+r++ dp +++++Y+g+H++ ONIVA01G28420.1 152 LDDGFSWRKYGQKDILGAKYPRAYFRCTHRhtqGCHASKQVQRADGDPLLFDVVYHGDHTCA 213 59***************************98999*************************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 326 aa Download sequence |
MEGSSSDGSR YGGAGRCALV AELVQMQGMV RQLEAEMGTH GGGGGGGGGA APMAAGADER 60 CRALVSGLLS SIDRSISIAR SCCTEAAAAG RLTQQAGAAP ESPPSVDGSA GSDLGADSRC 120 RANAAGPCKK RKTLPKWSKQ VKVRSVQDVG PLDDGFSWRK YGQKDILGAK YPRAYFRCTH 180 RHTQGCHASK QVQRADGDPL LFDVVYHGDH TCAHGVRSAA AAIDGQAAAS AEQKHQPTPP 240 QEQNAVSVAF TSMAVVNAST SSPFVSPAMS DCQISYELGG GSMAGVRNVP DVELASKTNS 300 SMGDDMEFMF SLDADFLDTY KYSSYF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G23810.1 | 9e-42 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA01G28420.1 |