PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA01G26820.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | MYB_related | ||||||||
Protein Properties | Length: 93aa MW: 10147.1 Da PI: 8.9476 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 29.1 | 2.3e-09 | 19 | 65 | 3 | 46 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46 WT++ +++ +a + + ++ +W+ +ar+mg +++++++ ++ ONIVA01G26820.1 19 EWTKQQNKQFERALAVYDTDapdRWHNVARYMGGAKSAEEVRRHYER 65 7********************************999********975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 93 aa Download sequence |
MASSSKASSS SSASAASSEW TKQQNKQFER ALAVYDTDAP DRWHNVARYM GGAKSAEEVR 60 RHYERLQADV EHIEAGGVPF SLGYGATPQA GRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75250.2 | 2e-24 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA01G26820.1 |