PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA01G26380.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | WRKY | ||||||||
Protein Properties | Length: 380aa MW: 39899 Da PI: 7.0634 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 102 | 3.3e-32 | 206 | 263 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s++prsYYrCt+++C vkk+vers +dp++v++tYeg+H+h+ ONIVA01G26380.1 206 EDGYRWRKYGQKAVKNSPYPRSYYRCTTPKCGVKKRVERSYQDPSTVITTYEGQHTHH 263 8********************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 380 aa Download sequence |
MSSGGGGGGG GGDRHGPYHQ HGHLGRGEGA DYVYSSSDME SFFFSQPGGV GIGGGGGGVV 60 GAGGADEIMP YSSITDYLQG LLDPSGLARH LDVACPSSQD TAVKQELSVD VTSHDSQGTG 120 GVAGEGVAQA TPNSSASFSS SDGEAEGGKS SRRCKKGQAK AEEEDDKDEE DAENSKKPNK 180 PKKKAEKRQR QPRVAFLTKS EVDHLEDGYR WRKYGQKAVK NSPYPRSYYR CTTPKCGVKK 240 RVERSYQDPS TVITTYEGQH THHSPASLRG GGGGVGIVGG HHHHHLFMPG VHGLPPSHLM 300 PAGFHPELMG LMHHHPAMAA AAANPSMYFP GVAASAPPPP AVAGGGAMPP NDHPPLQQHH 360 FTDYALLQDL FPSTMPSSNP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 152 | 187 | RRCKKGQAKAEEEDDKDEEDAENSKKPNKPKKKAEK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18170.1 | 6e-45 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA01G26380.1 |