PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA01G26290.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family WRKY
Protein Properties Length: 344aa    MW: 36352.1 Da    PI: 6.1805
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA01G26290.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY85.16.7e-27173231259
                      --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                      +D ++WrKYGqK++kgs++pr+YY+C+s  gC+++k vers   p ++++tY  eH h+
  ONIVA01G26290.1 173 SDLWAWRKYGQKPIKGSPYPRGYYKCSSMkGCMARKMVERSPAKPGMLVVTYMAEHCHP 231
                      799***********************9988***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    
MRGPLLLRAV VVVAMEHFND WDLQAVVRSC SFPQSEPPRV GVGVPAAPGA GGAPVVVAPP  60
ARAPDGPDQM ARASASALYD LEYLDLDHKP FLLPGSSSSR AVARARGEDD GKGRHEVMIS  120
FPAAAAASTS GAQPRSPSGR KPGIRTPRPK RSKKSQLKKV VYEVPVADGG VSSDLWAWRK  180
YGQKPIKGSP YPRGYYKCSS MKGCMARKMV ERSPAKPGML VVTYMAEHCH PVPTQLNALA  240
GTTRHKSAPT GDDDKPTSPG PAAGRAAAGE GVVKCEDVDG NELSAMAADG GAEDTAAAVD  300
DDGELWPEGM GLELDEFLGP MDDDVFEFDH VLEDDGVLGR RLSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.17e-40WRKY family protein