PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA01G25660.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family CPP
Protein Properties Length: 179aa    MW: 20383.5 Da    PI: 8.4904
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA01G25660.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR22.42.5e-077899223
              TCR  2 ekkgCnCkkskClkkYCeCfaa 23
                     + kgC C ks C k+YCeC + 
  ONIVA01G25660.1 78 QVKGCACCKSGCRKLYCECLQV 99
                     689****************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    
MQLVGSAKAC TWTEKLYKQA IFRVHQASKT TCWEETWGLH LRLILFNGSV WAKRNRHLCR  60
CNKSSYCLQW MVASVRNQVK GCACCKSGCR KLYCECLQVT DTDIQRFDDN GDSSGTSGYS  120
SGTIMGQYKF DDGLEIRRHN HIIDMAALIL KVLILNEEQQ NELLTTKHAQ DGLTLKILS