PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA01G23780.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family MYB_related
Protein Properties Length: 297aa    MW: 32362.6 Da    PI: 7.653
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA01G23780.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.62.9e-13556147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqky 47
                     ++rWT+eE+  l+ +v+++G+g W+tI r          R+  ++k++w+++
  ONIVA01G23780.1  5 KQRWTAEEEAALKAGVAKHGTGKWRTILRDPEftallRLRSNVDLKDKWRNL 56
                     79***********************************99***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MGAPKQRWTA EEEAALKAGV AKHGTGKWRT ILRDPEFTAL LRLRSNVDLK DKWRNLSVTA  60
GGYGSRERAR VALKGGKRGP KALAEPMDAD EKNPDIDDNA IIDAQPLAVV VEPMQLESTP  120
EKEKSVARLD DLILEAIKKL KEPSGSNRTT ISSYIEEQYW PPEDFQRLLS TKLKALVATG  180
KLIKVNQKYR IAPSSNSSGG KSIKVYSTGE MNIENNNVRQ LSKPQVDAEL DKMKSMSKEE  240
AAAFAARAVA EAEAAIAEAE EAARAAEAAE AEADAAKAFL DAVVTTMQNR NHASAVY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49950.11e-70MYB_related family protein