PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA01G23570.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family WRKY
Protein Properties Length: 298aa    MW: 31143.6 Da    PI: 8.4134
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA01G23570.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY62.67e-201471941359
                      E--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY  13 KevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                      K+ kg++ pr+YYrCt a gCpvkk+v+r+++d++v+++tY g Hnh+
  ONIVA01G23570.1 147 KTAKGNPWPRGYYRCTGApGCPVKKQVQRCNHDTSVLVTTYDGVHNHP 194
                      889*************999****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MNTFTFFRDE VQKASEKVHR HHANDDEAGL FLSLGLSLGS SPDACQCHAS KKDEADAGNG  60
GGDGYLALAL RCAPAAGEPM VHPKRQRATT NSSSSSSICG EYGGGAAAAT VPAGHDDDDR  120
SCMITAASTA NRPGRVVLRT RCSAPTKTAK GNPWPRGYYR CTGAPGCPVK KQVQRCNHDT  180
SVLVTTYDGV HNHPITPYAA ALPPSSSSSS SAAAAMLASS SSSSTWSELQ RAMPAAQSSW  240
SQRNYPIQAD VVAKAIWDPK FQATVAAAVA SYVRDREQSA RVAGGKGAGE LFNLAPPC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68150.13e-26WRKY family protein