PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA01G23410.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | WRKY | ||||||||
Protein Properties | Length: 246aa MW: 26484.7 Da PI: 8.1949 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 98.6 | 4.1e-31 | 136 | 194 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYG+K+vk+s++pr+YYrC+s+gC+vkk+ver+++d ++v++tY g Hnh+ ONIVA01G23410.1 136 LDDGYRWRKYGKKMVKNSPNPRNYYRCSSEGCRVKKRVERARDDARFVVTTYDGVHNHP 194 59********************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence |
MSSLYPSLLS LSESPAEYRQ VGGGRYAGED VVVDDDDMAA VADAVSSYLS FDMDDVEYYT 60 PEVGFHSKQH NPPPVAAAPL EAGGGREQSR REAAVNLGKM DRGPAPVSGG AATGGVPRSK 120 NGSKIAFKTR SEVDVLDDGY RWRKYGKKMV KNSPNPRNYY RCSSEGCRVK KRVERARDDA 180 RFVVTTYDGV HNHPAPLHLR PQLPPPGGYS IAGAPAVVAP HGRLGLEEAE VIALFRGTTA 240 TSLLLP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G26170.1 | 8e-38 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA01G23410.1 |