PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA01G22740.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | LBD | ||||||||
Protein Properties | Length: 175aa MW: 18252.6 Da PI: 5.6026 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 103.3 | 2.1e-32 | 26 | 132 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpa..eqp...kkfanvhklFGasnvlkllkal..peeeredamsslvyeAearardPvyGavgvilklqqql 87 aCaaC++l+r+C+++C+la++fpa +qp + f+n+ +lFG+ nv+ +l a+ ++ +r+da+ s++yeA+ara+dPv+Ga+gv+++l+++l ONIVA01G22740.1 26 ACAACAHLGRACPTGCPLARCFPAagNQPadgRLFRNAFRLFGVGNVVGFLLAAggDPGKRRDAAVSVAYEADARADDPVRGAHGVVMDLEREL 119 7*********************996644456699*****************999889999********************************** PP DUF260 88 eqlkaelallkee 100 ++lkaela++++ ONIVA01G22740.1 120 DCLKAELATAQSA 132 ********99875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 175 aa Download sequence |
MAQPWRPFVA DISPVAVADD DDPPAACAAC AHLGRACPTG CPLARCFPAA GNQPADGRLF 60 RNAFRLFGVG NVVGFLLAAG GDPGKRRDAA VSVAYEADAR ADDPVRGAHG VVMDLERELD 120 CLKAELATAQ SALARHRQYA QPPPPPPPPP PDALDRARAL NYFCHGCCGD VDGAA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G07900.1 | 6e-15 | LBD family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA01G22740.1 |