PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA01G19420.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | GeBP | ||||||||
Protein Properties | Length: 509aa MW: 55531.4 Da PI: 8.3155 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 41.7 | 3.1e-13 | 257 | 347 | 3 | 97 |
DUF573 3 fqrlwseeDeivlLqGlidfkaktgkspsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskki 95 f r w+ +Dei++L +l+d + g p++ f+e v++ ++++s++ eK+r+LK+++++ v +++k+hd + els i ONIVA01G19420.1 257 FGRKWNGNDEIMILEALVDQIRSGGNVPQEpGHPLFHELVQRLEGRTFNHSDVREKVRSLKRRYNDVVLS-----GLAITKDHDLQLHELSCEI 345 6799****************999999998845556777777777789********************999.....789**************** PP DUF573 96 Wg 97 Wg ONIVA01G19420.1 346 WG 347 *8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 509 aa Download sequence |
MRRRSPPPAA AQPPRPPTRA AESGEEGGDP GKDEVAAPPK GDSALPRSGS GFGSGNAAAP 60 DGPAKSPMKP KKRVTAPPSS DHGSRENLAA GSPSNEVPAP QGDDAAQEDD LPESPPKSKK 120 NRKKKKKALR AGDSGKVAAP DDPAEPTRPQ QDVGEVDGRL AESEQEVPPN AGKAKKKASA 180 QARKKPSAKQ HAAAQEEEDG DLMAEAEEEV APRQGDEEDG KGPLPQRKSK RVAALSGSIC 240 PPDPKRAKIV DAQKPGFGRK WNGNDEIMIL EALVDQIRSG GNVPQEPGHP LFHELVQRLE 300 GRTFNHSDVR EKVRSLKRRY NDVVLSGLAI TKDHDLQLHE LSCEIWGRSV AHAGDDKQRC 360 LARDEQSSLA RDEQKSFAGD EEKSLARDEQ SSLARDEQKS FARDEKSLAR DEEKSLASDE 420 QRSFDDMCKQ FPLLAKEIKV LMEGQPAIME LFPRLDSDQV VAIEKKLENL RWIDMKRKKK 480 MAVKMAKIRK GLIYKLEGAV ILADGNMIR |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 119 | 127 | KKNRKKKKK |
2 | 173 | 185 | KAKKKASAQARKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G61730.1 | 5e-07 | GeBP family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA01G19420.1 |