PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA01G16280.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

G2-like

Protein Properties

Length: 391aa MW: 44160.8 Da PI: 9.3932

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA01G16280.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	27.3	7.8e-09	125	187	1	55
G2-like 1 kprlrWtpeLHerFveaveqL..GGsekAtPktilelmkv.......kgLtlehvkSHLQkYRl 55 k+r WtpeL + F+e e+L G++ +P +ilelmk+ + Lt++ v S LQkY+ ONIVA01G16280.1 125 KKRFIWTPELSKIFIEIYEELllTGIN-PVPTKILELMKLrigpmndPELTRNTVSSYLQKYKA 187 6899************985336776.8****976333333368***********85 PP

Sequence ? help Back to Top
Protein Sequence Length: 391 aa Download sequence
MVVVGDEAVQ RAVVLRLGVN FRATVCSEIN AAVEMLRERT KEFDFAVISE ESIRSLRPEI 60 MKFLGEETGL RLLVSCPSSG DQTRNCSTAA AAAAAAVASS VRRATNGRKH RRRAGEKSSQ 120 HRQRKKRFIW TPELSKIFIE IYEELLLTGI NPVPTKILEL MKLRIGPMND PELTRNTVSS 180 YLQKYKAYLL KQEQKDQQLP IDDNTNTSSI KSQQGSASLQ QQIMNYGEND SMDNQSIILS 240 QTRYNEHSNK QPKLLTANYH GPRNMHHHHK NTNMQPSNVL RPPNLINAKG FNMSFNKEEI 300 NEAIYQSQLT TRRVSATHAI AKAQASWRVT MTKDMHPISQ LHQQDDETTP DDSSNNTNSI 360 YEKYGEGVSS NNTFGLVLAI ELRTTTTDIE L

Sequence ? help Back to Top

Protein Sequence Length: 391 aa Download sequence

MVVVGDEAVQ RAVVLRLGVN FRATVCSEIN AAVEMLRERT KEFDFAVISE ESIRSLRPEI  60
MKFLGEETGL RLLVSCPSSG DQTRNCSTAA AAAAAAVASS VRRATNGRKH RRRAGEKSSQ  120
HRQRKKRFIW TPELSKIFIE IYEELLLTGI NPVPTKILEL MKLRIGPMND PELTRNTVSS  180
YLQKYKAYLL KQEQKDQQLP IDDNTNTSSI KSQQGSASLQ QQIMNYGEND SMDNQSIILS  240
QTRYNEHSNK QPKLLTANYH GPRNMHHHHK NTNMQPSNVL RPPNLINAKG FNMSFNKEEI  300
NEAIYQSQLT TRRVSATHAI AKAQASWRVT MTKDMHPISQ LHQQDDETTP DDSSNNTNSI  360
YEKYGEGVSS NNTFGLVLAI ELRTTTTDIE L

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	111	127	RRRAGEKSSQHRQRKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G59570.1	8e-09	G2-like family protein

Link Out ? help Back to Top
Ensembl	ONIVA01G16280.1