PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA01G14480.6

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

SBP

Protein Properties

Length: 834aa MW: 92823.9 Da PI: 7.1322

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA01G14480.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	118.5	3.3e-37	106	183	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqv+gC+++ls+a++y++rhkvCevh+k+ vv ++++e+rfCqqCsrfh l+efDe+k+sCr+rLa+hn+rrrk q ONIVA01G14480.6 106 CCQVDGCTVNLSSARDYNKRHKVCEVHTKSGVVRIKNVEHRFCQQCSRFHFLQEFDEGKKSCRSRLAQHNRRRRKVQV 183 6**************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 834 aa Download sequence
MSSGLKKKGL EWDLNDWRWD SNLFLATPSN ASPSKCSRRE LGRAEGEIDF GVVDKRRRVS 60 PEDDDGEECI NAATTNGDDG QISGQRGRSS EDEMPRQGAC SSSGPCCQVD GCTVNLSSAR 120 DYNKRHKVCE VHTKSGVVRI KNVEHRFCQQ CSRFHFLQEF DEGKKSCRSR LAQHNRRRRK 180 VQVQAASGPS EQINGPNYLT NLVKNLAALA GTQRNQDMLK NANSAAIASH TGNYVAKGNS 240 LHDSRPHIPV GTESTAEEPT VERRVQNFDL NDAYVEGDEN RTDKIVFKLF GKEPNDFPSD 300 LRAQILSWLS NCPSDIESYI RPGCIILTIY MRLPNWMWDK LAADPAHWIQ KLISLSTDTL 360 WRTGWMYARV QDYLTLSCNG NLILASPWQP AIGNKHQILF ITPIAVACSS TANFSVKGLN 420 IAQPTTKLLC IFGGKYLIQE ATEKLLDDTK MQRGPQCLTF SCSFPSTSGR GFIEVEDHDQ 480 SSLSFPFVVA EEDVCSEIRT LEHLLNLVSF DDTLVEKNDL LASRDRALNF LHEFGWFLQR 540 SHIRATSETP KDCTEGFPAA RFRWLLSFAV DREFCAVIKK LLDTLFQGGV DLDVQSTVEF 600 VLKQDLVFVA VNKRSKPLID FLLTYTTSSA PMDGTESAAP AQFLFTPDIA GPSDITPLHI 660 AATYSDTAGV LDALTDDPQQ LGIKAWKNAR DATGLTPEDY ARKRGHESYI EMVQNKIDSR 720 LPKAHVSVTI SSTTSTTDFT EKHASQSKTT DQTAFDVEKG QQISTKPPLS CRQCLPELAY 780 RHHLNRFLST RPAVLSLVAI AAVCVCVGLI MQGPPHIGGM RGPFRWNSLR SGPK

Sequence ? help Back to Top

Protein Sequence Length: 834 aa Download sequence

MSSGLKKKGL EWDLNDWRWD SNLFLATPSN ASPSKCSRRE LGRAEGEIDF GVVDKRRRVS  60
PEDDDGEECI NAATTNGDDG QISGQRGRSS EDEMPRQGAC SSSGPCCQVD GCTVNLSSAR  120
DYNKRHKVCE VHTKSGVVRI KNVEHRFCQQ CSRFHFLQEF DEGKKSCRSR LAQHNRRRRK  180
VQVQAASGPS EQINGPNYLT NLVKNLAALA GTQRNQDMLK NANSAAIASH TGNYVAKGNS  240
LHDSRPHIPV GTESTAEEPT VERRVQNFDL NDAYVEGDEN RTDKIVFKLF GKEPNDFPSD  300
LRAQILSWLS NCPSDIESYI RPGCIILTIY MRLPNWMWDK LAADPAHWIQ KLISLSTDTL  360
WRTGWMYARV QDYLTLSCNG NLILASPWQP AIGNKHQILF ITPIAVACSS TANFSVKGLN  420
IAQPTTKLLC IFGGKYLIQE ATEKLLDDTK MQRGPQCLTF SCSFPSTSGR GFIEVEDHDQ  480
SSLSFPFVVA EEDVCSEIRT LEHLLNLVSF DDTLVEKNDL LASRDRALNF LHEFGWFLQR  540
SHIRATSETP KDCTEGFPAA RFRWLLSFAV DREFCAVIKK LLDTLFQGGV DLDVQSTVEF  600
VLKQDLVFVA VNKRSKPLID FLLTYTTSSA PMDGTESAAP AQFLFTPDIA GPSDITPLHI  660
AATYSDTAGV LDALTDDPQQ LGIKAWKNAR DATGLTPEDY ARKRGHESYI EMVQNKIDSR  720
LPKAHVSVTI SSTTSTTDFT EKHASQSKTT DQTAFDVEKG QQISTKPPLS CRQCLPELAY  780
RHHLNRFLST RPAVLSLVAI AAVCVCVGLI MQGPPHIGGM RGPFRWNSLR SGPK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	55	59	KRRRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47070.1	0.0	SBP family protein

Link Out ? help Back to Top
Ensembl	ONIVA01G14480.6