PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA01G14320.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

WRKY

Protein Properties

Length: 604aa MW: 62097.5 Da PI: 7.6266

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA01G14320.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.5	1.8e-30	317	375	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed++v+++tYeg+Hnh+ ONIVA01G14320.1 317 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAiGCPVRKQVQRCAEDKTVLITTYEGNHNHQ 375 7*********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 604 aa Download sequence
MELRPPPPKH HHHRRRRGGG GEDGGEEEEE EAGRLSLRGG GFWRRHDGEE EEEKGGGRRG 60 EIKEVDFFLG ASGRDVVVAS RRHDDGFRGT THGGGGGGDV NIGLDLLTTT TAGAAAGGAA 120 AGAGEEDTGK NHRKEATTAA VDVELRRVVE ENRRLRGMLD ELTRSYSALY HQYLQVTQQQ 180 NHRHPDHHLI MNNNNNRPSL AQTHRTAATT TATTQQFLEP RASSTAQATA DADMAASDDE 240 AGRGGGDGDA SSPSLSNAAA GGGGGGNKMR RVGGQDETAA AAPARENGEQ QAAAAAELPC 300 RKPRVSVRAR SEAPMISDGC QWRKYGQKMA KGNPCPRAYY RCTMAIGCPV RKQVQRCAED 360 KTVLITTYEG NHNHQLPPAA TTMANTTSAA AAMLLSGPAA SRDGAAAALL GHHHHHHPAA 420 MFHQSFPYAS TMATLSASAP FPTITLDLTQ TPAGGAGAAS LLHALHRPPV IHPGAAAQAM 480 PFAVPPQLAM YLPQQRAAAA GLGGAGAARQ PSVMETVTAA LAADPNFTTA LAAAISSVVA 540 GGAHHQALST TPRGSAAGAG DGNGNGSSAA AVATGAASPA ATAEAPAASG SPPRLATQSC 600 TTSN

Sequence ? help Back to Top

Protein Sequence Length: 604 aa Download sequence

MELRPPPPKH HHHRRRRGGG GEDGGEEEEE EAGRLSLRGG GFWRRHDGEE EEEKGGGRRG  60
EIKEVDFFLG ASGRDVVVAS RRHDDGFRGT THGGGGGGDV NIGLDLLTTT TAGAAAGGAA  120
AGAGEEDTGK NHRKEATTAA VDVELRRVVE ENRRLRGMLD ELTRSYSALY HQYLQVTQQQ  180
NHRHPDHHLI MNNNNNRPSL AQTHRTAATT TATTQQFLEP RASSTAQATA DADMAASDDE  240
AGRGGGDGDA SSPSLSNAAA GGGGGGNKMR RVGGQDETAA AAPARENGEQ QAAAAAELPC  300
RKPRVSVRAR SEAPMISDGC QWRKYGQKMA KGNPCPRAYY RCTMAIGCPV RKQVQRCAED  360
KTVLITTYEG NHNHQLPPAA TTMANTTSAA AAMLLSGPAA SRDGAAAALL GHHHHHHPAA  420
MFHQSFPYAS TMATLSASAP FPTITLDLTQ TPAGGAGAAS LLHALHRPPV IHPGAAAQAM  480
PFAVPPQLAM YLPQQRAAAA GLGGAGAARQ PSVMETVTAA LAADPNFTTA LAAAISSVVA  540
GGAHHQALST TPRGSAAGAG DGNGNGSSAA AVATGAASPA ATAEAPAASG SPPRLATQSC  600
TTSN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G04450.1	1e-54	WRKY family protein

Link Out ? help Back to Top
Ensembl	ONIVA01G14320.1