PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA01G14150.2

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

bHLH

Protein Properties

Length: 700aa MW: 75046.6 Da PI: 8.8456

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA01G14150.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	49.2	9.1e-16	530	576	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P++ K +Ka++L +A+eY+k Lq ONIVA01G14150.2 530 VHNLSERRRRDRINEKMRALQELIPNC-----NKIDKASMLDEAIEYLKTLQ 576 5***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 700 aa Download sequence
MTVEWWTQIH ARTDGLTHAL THTYRGLTRG RCREPGAWGC GCNRCVALRP PTPQPLIPHA 60 DQQRRPARPP LHLRLRLRLR FLFSSSLPPS SERKRELTSR CPAGRGGEHG FAFGWSSRLC 120 TRSTAANSSF LDFFTLSPRT AQMSDGNDFA ELLWENGQAV VHGRKKHPQP AFPPFGFFGG 180 TGGGGGGSSS RAQERQPGGI DAFAKVGGGF GALGMAPAVH DFASGFGATT QDNGDDDTVP 240 WIHYPIIDDE DAAAPAALAA ADYGSDFFSE LQAAAAAAAA AAPPTDLASL PASNHNGATN 300 NRNAPVATTT TREPSKESHG GLSVPTTRAE PQPQPQLAAA KLPRSSGSGG REGVMNFSLF 360 SRPAVLARAT LESAQRTQGT DNKASNVTAS NRVESTVVQT ASGPRSAPAF ADQRAAAWPP 420 QPKEMPFAST AAAPMAPAVN LHHEMGRDRA GRTMRVHKTE ARKAPEATVA TSSVCSGNGA 480 GSDELWRQQK RKCQAQAECS ASQDDDLDDE PGVLRKSGTR STKRSRTAEV HNLSERRRRD 540 RINEKMRALQ ELIPNCNKID KASMLDEAIE YLKTLQLQVQ LSLTQMMSMG TGLCIPPMLL 600 PTAMQHLQIP PMAHFPHLGM GLGYGMGVFD MSNTGALQMP PMPGAHFPCP MIPGAMANMV 660 QDQQQGIANQ QQQCLNKEAI QGANPGDSQM QIIMQVLIKN

Sequence ? help Back to Top

Protein Sequence Length: 700 aa Download sequence

MTVEWWTQIH ARTDGLTHAL THTYRGLTRG RCREPGAWGC GCNRCVALRP PTPQPLIPHA  60
DQQRRPARPP LHLRLRLRLR FLFSSSLPPS SERKRELTSR CPAGRGGEHG FAFGWSSRLC  120
TRSTAANSSF LDFFTLSPRT AQMSDGNDFA ELLWENGQAV VHGRKKHPQP AFPPFGFFGG  180
TGGGGGGSSS RAQERQPGGI DAFAKVGGGF GALGMAPAVH DFASGFGATT QDNGDDDTVP  240
WIHYPIIDDE DAAAPAALAA ADYGSDFFSE LQAAAAAAAA AAPPTDLASL PASNHNGATN  300
NRNAPVATTT TREPSKESHG GLSVPTTRAE PQPQPQLAAA KLPRSSGSGG REGVMNFSLF  360
SRPAVLARAT LESAQRTQGT DNKASNVTAS NRVESTVVQT ASGPRSAPAF ADQRAAAWPP  420
QPKEMPFAST AAAPMAPAVN LHHEMGRDRA GRTMRVHKTE ARKAPEATVA TSSVCSGNGA  480
GSDELWRQQK RKCQAQAECS ASQDDDLDDE PGVLRKSGTR STKRSRTAEV HNLSERRRRD  540
RINEKMRALQ ELIPNCNKID KASMLDEAIE YLKTLQLQVQ LSLTQMMSMG TGLCIPPMLL  600
PTAMQHLQIP PMAHFPHLGM GLGYGMGVFD MSNTGALQMP PMPGAHFPCP MIPGAMANMV  660
QDQQQGIANQ QQQCLNKEAI QGANPGDSQM QIIMQVLIKN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	535	540	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09530.2	1e-24	bHLH family protein

Link Out ? help Back to Top
Ensembl	ONIVA01G14150.2