PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA01G12770.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

Dof

Protein Properties

Length: 550aa MW: 59862.6 Da PI: 4.6833

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA01G12770.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	126.3	9.7e-40	163	222	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++k+l+cprC+s++tkfCyynny+++qPr+fCk+C+ryWt+GG++rnvPvG+grrk+k+s ONIVA01G12770.1 163 PDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKSKSS 222 7899*****************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 550 aa Download sequence
MCDKDPGIKL FGRVIPLAPE AEAAAAADGS DQPEAAAAAA EVEPAAQDED HHKETEERKD 60 DEMKVDVPQE EEDNEMKVDA PQEKKDNEVT ADVPEEKGND EMRVDASESI ESIEPVSRST 120 LDNKKEDQGQ MNNVEEKAAS DSKDENEKTA NDESGQDKVL KKPDKILPCP RCNSMDTKFC 180 YYNNYNVNQP RHFCKNCQRY WTAGGTMRNV PVGAGRRKSK SSSLHYRHLL MAPDCMMGSR 240 VEISKSMNPE AFASAHSTPI QPIGRNETVL KFGPEVPLCE SMASVLNIQE QNGTNAAAVP 300 TGENQEDNSC ISSITSHNVL PENAAQVDKN STPVYCNGVG PVPQYYLGAP YMYPWNIGWN 360 NVPMMVPGTS MPESASQSES CSTSSAPWMN MNSPMMPVAS RLSAPPFPYP LVPPALWGCL 420 SSWPATAWNI PWIRTNGGCM SPSSSSNSSC SGNGSPLGKH SRDSSLPLKE DKEEKSLWIP 480 KTLRIDDPDE AAKSSIWATL GIKPGDPGIF KPFQSKGESK GQAASETRPA RALKANPAAL 540 SRSQSFQETS

Sequence ? help Back to Top

Protein Sequence Length: 550 aa Download sequence

MCDKDPGIKL FGRVIPLAPE AEAAAAADGS DQPEAAAAAA EVEPAAQDED HHKETEERKD  60
DEMKVDVPQE EEDNEMKVDA PQEKKDNEVT ADVPEEKGND EMRVDASESI ESIEPVSRST  120
LDNKKEDQGQ MNNVEEKAAS DSKDENEKTA NDESGQDKVL KKPDKILPCP RCNSMDTKFC  180
YYNNYNVNQP RHFCKNCQRY WTAGGTMRNV PVGAGRRKSK SSSLHYRHLL MAPDCMMGSR  240
VEISKSMNPE AFASAHSTPI QPIGRNETVL KFGPEVPLCE SMASVLNIQE QNGTNAAAVP  300
TGENQEDNSC ISSITSHNVL PENAAQVDKN STPVYCNGVG PVPQYYLGAP YMYPWNIGWN  360
NVPMMVPGTS MPESASQSES CSTSSAPWMN MNSPMMPVAS RLSAPPFPYP LVPPALWGCL  420
SSWPATAWNI PWIRTNGGCM SPSSSSNSSC SGNGSPLGKH SRDSSLPLKE DKEEKSLWIP  480
KTLRIDDPDE AAKSSIWATL GIKPGDPGIF KPFQSKGESK GQAASETRPA RALKANPAAL  540
SRSQSFQETS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	8e-70	Dof family protein

Link Out ? help Back to Top
Ensembl	ONIVA01G12770.1