PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA01G11570.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | C2H2 | ||||||||
Protein Properties | Length: 459aa MW: 47530.9 Da PI: 8.6901 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 18.9 | 4.2e-06 | 25 | 47 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cgk F r nL+ H r H ONIVA01G11570.1 25 FVCEICGKGFQRDQNLQLHRRGH 47 89*******************88 PP | |||||||
2 | zf-C2H2 | 12.9 | 0.00033 | 101 | 123 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k++ +s+ k H +t+ ONIVA01G11570.1 101 WKCDKCSKRYAVQSDWKAHSKTC 123 58*****************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 459 aa Download sequence |
MSVGADPEAE VIALSPRTLM ATNRFVCEIC GKGFQRDQNL QLHRRGHNLP WKLRQRSGKE 60 PRKRVYVCPE KSCVHHNPSR ALGDLTGIKK HFCRKHGEKK WKCDKCSKRY AVQSDWKAHS 120 KTCGTREYRC DCGTLFSRRD SFITHRAFCD ALAEETARLN AASGAAAAAA AATATSLCGQ 180 SYLFAGSGGP GMAGMRPNMM MPPAAAAAGG QLRAGQMLGP AAGGVGGDLC DGGVARHGGL 240 SLWGGEALPS MGHIGVLASG GAATVPPQLY VDLFAPSSGA PPPQLDAAQL SWLYGNGKLS 300 SSNASELTSA TAAAKEAESV PSVFSNQQHA KPAAPTDMSA TALLQKAAQI GAVTSTAAMP 360 LVSPFEPTKP GGATASPADE CGKFDGAALF AAASHHNANL GGAMSELMAA AGNVPYDVLS 420 AVRHHAGLKD AGGVGREETR DFLGVGVQAL CSSSIHGWI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G03840.1 | 1e-108 | C2H2 family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA01G11570.1 |