PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA01G11220.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ARF
Protein Properties Length: 708aa    MW: 78277.3 Da    PI: 5.5272
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA01G11220.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B368.11.2e-21131230197
                      EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
               B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                      f+k+ltpsd++++g +++ +++a+e+       +     +++l+ +d++g +W++k+iyr++++r++lt+GW+ Fv +++L +gD +v  +  +
  ONIVA01G11220.1 131 FCKILTPSDTSTHGGFSVLRRHANEClppldmsMAT--PTQELITKDLHGSEWRFKHIYRGQPRRHLLTTGWSTFVTSKKLISGDAFVYLR--S 220
                      99****************************974333..3458999******************************************9994..4 PP

                      SEE..EEEEE CS
               B3  88 sefelvvkvf 97 
                      +++e +v+v+
  ONIVA01G11220.1 221 ETGEQRVGVR 230
                      6777788886 PP
2Auxin_resp96.93e-32257338183
       Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                      a+ha++t+s+F v+Y+Pr s+s+++v+v+k+++a kv + vGmRfkm+fe+ed++ +++sGt+vg  d  +++W++S+W+sLk
  ONIVA01G11220.1 257 ASHAIKTNSIFLVYYRPRLSQSQYIVSVNKYLAASKVGFNVGMRFKMSFEGEDVPVKKFSGTIVGEGD-LSLQWSGSEWKSLK 338
                      789*****************************************************************.566*********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 708 aa     Download sequence    
MSSQGLMVGG AHAGAGGGVG DPELFAELWR ACAGPLVEVP QRDERVFYFL QGHLEQLQEP  60
TDPALLAEQI KMFQVPYKIL CKVVNVELKA ETETDEVFAQ ITLQPDPDQE NLPTLPDPPL  120
PEQPRPVVHS FCKILTPSDT STHGGFSVLR RHANECLPPL DMSMATPTQE LITKDLHGSE  180
WRFKHIYRGQ PRRHLLTTGW STFVTSKKLI SGDAFVYLRS ETGEQRVGVR HLVQKQSTMP  240
ASVISSQSMH LGVLASASHA IKTNSIFLVY YRPRLSQSQY IVSVNKYLAA SKVGFNVGMR  300
FKMSFEGEDV PVKKFSGTIV GEGDLSLQWS GSEWKSLKVQ WDEVTNVNGP ERVSPWEIET  360
CDGTAPAINV PLQSATKNKR PREPSETIDL QSLEPAQEFW LSGMPQQHEK TGIGSSEPNC  420
ISGHQVVWPG EHPGYGAVSS SVCQNPLVLE SWLKDFNSSN KGVSPTLSEI SQKIFQVTSN  480
EARIATWPAR SAYQAEEPTS KLSSNTAACG YRTEEVAPNA SKVVEGKKEP AMFRLFGVDL  540
MKCTSISTTT DDKSSVGAGE ASAKGTGSHE DSGQLSAFSK VTKEHIAADE SPQEIQSHQN  600
YTARTRIKVQ MHGNAVGRAV DLANLDGYEQ LMNELEEMFN IKDLKQKWKV AFTDDEGDTM  660
EVGDDPWLEF CQMVRKIVLY PIEDEKKIEP HPKLLSSANP EQDQKTGF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59750.11e-180ARF family protein