PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA01G10020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | ERF | ||||||||
Protein Properties | Length: 375aa MW: 39816.4 Da PI: 4.5816 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.6 | 1.8e-19 | 143 | 193 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ++++GVr+++ +g+++AeIrd + r r++lg+f+taeeAak ++ a+ +l+g ONIVA01G10020.1 143 PRFRGVRRRP-WGKYAAEIRDpW-----RrVRVWLGTFDTAEEAAKVYDTAAIQLRG 193 689*******.**********88.....55*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 375 aa Download sequence |
MEEEGFVALK RTEHVEVTSL AVAVEATPSA KGGKGKVVVG GGGAGGGVGP TRVRVFCDDF 60 DATDSSSDED EEEEVTARRR VKRYVQEIRL QRAAAVAVPP VKVKGEEVFP AAVSAKMAEA 120 AKARVVLAAG RKRKAGGVDG AEPRFRGVRR RPWGKYAAEI RDPWRRVRVW LGTFDTAEEA 180 AKVYDTAAIQ LRGRDATTNF NQSGDSASLD VPPEVAERVP QPPGASKNAS PATSYDSGEE 240 SHAAAASPTS VLRSFPPSAV VATAVTANKK QLPPPPLVVR ETDESVDVFG CSFSDDGGFA 300 GELPPLYTDF DLLADFPEPP LDFLSNLPVE PFSLAPFSGN NGSPDLHLDD APSPAAAQVD 360 DFFQDITDLF QIPVV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G23750.1 | 3e-27 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA01G10020.1 |