PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA01G07970.5 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 893aa MW: 96802.9 Da PI: 6.4257 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 58.7 | 9.7e-19 | 12 | 70 | 3 | 57 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 k ++t+eq+e+Le+l++++++ps +r++L +++ +++ +q+kvWFqNrR +ek+ ONIVA01G07970.5 12 KYVRYTPEQVEALERLYYECPKPSSLRRQQLVRECpalaNVDPKQIKVWFQNRRCREKQ 70 6789*****************************************************97 PP | |||||||
2 | START | 58.6 | 2e-19 | 179 | 275 | 2 | 97 |
HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEE CS START 2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galql 93 +aee+++e+++ka+ ++ W +++ +++g++++ +++ s+++ g a+ra+g+v m++a v+e+l+d++ W ++++++++++v+ g g+++l ONIVA01G07970.5 179 IAEETLTEFLSKATGTAVEWLQMPGMKPGPDSIGIIAISHGCAGVAARACGLVGMEPA-KVAEILKDRPLWLRDCRSMDVVNVLPAGanGTIEL 271 789*******************************************************.8888888888******************9955554 PP EEEX CS START 94 mvae 97 +++ ONIVA01G07970.5 272 LYMQ 275 4433 PP | |||||||
3 | START | 93.8 | 3.4e-30 | 300 | 411 | 97 | 204 |
XXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHHH CS START 97 elqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslvk 186 +l+a+++l+p Rdf+ +Ry+ l +g++v++++S++s+q p+ ++++R+e+lpSg+li+p+++g+s +++v+h+dl+ +++++++r+l++ ONIVA01G07970.5 300 QLYAPTTLAPaRDFWLLRYTSILDDGSLVVCERSLSSKQGGPSmplVQPFIRGEMLPSGFLIRPSDGGGSVIHIVDHMDLEPWSVPEVVRPLYE 393 789***************************************999999********************************************** PP HHHHHHHHHHHHHTXXXX CS START 187 sglaegaktwvatlqrqc 204 s+++ ++k+ +a+l++++ ONIVA01G07970.5 394 SSAMVAQKISMAALRYLR 411 **************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 893 aa Download sequence |
MVASAAAMDA SKYVRYTPEQ VEALERLYYE CPKPSSLRRQ QLVRECPALA NVDPKQIKVW 60 FQNRRCREKQ RKESSRLQAL NRKLTAMNKL LMEENDRLQK QVSQLVYDHG RHGVAAAGMM 120 RRVPAFPPQA AAAAGHQLAT ATDTSCESVV TSGHHHQQQQ HNVVQPPPRD ASPAGLMSIA 180 EETLTEFLSK ATGTAVEWLQ MPGMKPGPDS IGIIAISHGC AGVAARACGL VGMEPAKVAE 240 ILKDRPLWLR DCRSMDVVNV LPAGANGTIE LLYMQARTHK PENSEPEPEI LKLKFVFDLQ 300 LYAPTTLAPA RDFWLLRYTS ILDDGSLVVC ERSLSSKQGG PSMPLVQPFI RGEMLPSGFL 360 IRPSDGGGSV IHIVDHMDLE PWSVPEVVRP LYESSAMVAQ KISMAALRYL RQVAHEDTRS 420 VITGWGRQPA ALRALSQKLT RGFNEALNGL ADDGWSVIES DGVDDVCISV NSSKVIGCNA 480 TFSSGLPIVS TGVLCAKASM LLQDVSPPSL LQFLREHRSQ WADSNLDAFF ASAMKPNFCN 540 LPMSRLGGFS GQVILPLAHT FEPEEFLEVI KLGNASNYQD TLVHRDLFLL QMYNGVEESS 600 AGTCSELIFA PIDASFSDDS PLLPSGFRII PIDSPLDTSS PNCTLDLAST LEAATPRSRI 660 SGVNGGGGGC AAAAASSSSK AVMTIAFQFA FDGHLQDSVA AMARQYMRNI ISSVQRIAVA 720 LSSSRLVPPG AAAAAAQLSP VTPEAATLPR WICQSYRFHF GAELIKSVDA NSSNESILKA 780 VWHHPSAILC CSLKAMPVFT FANQSGLDML ETTLVALQDM TLEKVFDDQG RKNLCTELPN 840 IMEQGMACME GGVCVSSVGR AASYEKAVAW KVVDGDGGGA HCICFMFINW TFL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G52150.1 | 0.0 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA01G07970.5 |