PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA01G07970.4
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family HD-ZIP
Protein Properties Length: 913aa    MW: 99108.6 Da    PI: 6.3461
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA01G07970.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.71e-181270357
                     --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
         Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                     k  ++t+eq+e+Le+l++++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  ONIVA01G07970.4 12 KYVRYTPEQVEALERLYYECPKPSSLRRQQLVRECpalaNVDPKQIKVWFQNRRCREKQ 70
                     6789*****************************************************97 PP
2START150.21.8e-471794112204
                      HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT....... CS
            START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg....... 88 
                      +aee+++e+++ka+ ++  W +++ +++g++++ +++ s+++ g a+ra+g+v m++a  v+e+l+d++ W ++++++++++v+  g       
  ONIVA01G07970.4 179 IAEETLTEFLSKATGTAVEWLQMPGMKPGPDSIGIIAISHGCAGVAARACGLVGMEPA-KVAEILKDRPLWLRDCRSMDVVNVLPAGangtiel 271
                      789*******************************************************.8888888888************************* PP

                      .................EEEEEEE...EXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEEC CS
            START  89 .................galqlmv...aelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepks 158
                                       ++l l +    +l+a+++l+p Rdf+ +Ry+  l +g++v++++S++s+q  p+    ++++R+e+lpSg+li+p++
  ONIVA01G07970.4 272 lymqarthkpensepepEILKLKFvfdLQLYAPTTLAPaRDFWLLRYTSILDDGSLVVCERSLSSKQGGPSmplVQPFIRGEMLPSGFLIRPSD 365
                      *****************555555422269999**************************************999999****************** PP

                      TCEEEEEEEE-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXX CS
            START 159 nghskvtwvehvdlkgrlphwllrslvksglaegaktwvatlqrqc 204
                      +g+s +++v+h+dl+ +++++++r+l++s+++ ++k+ +a+l++++
  ONIVA01G07970.4 366 GGGSVIHIVDHMDLEPWSVPEVVRPLYESSAMVAQKISMAALRYLR 411
                      ******************************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 913 aa     Download sequence    
MVASAAAMDA SKYVRYTPEQ VEALERLYYE CPKPSSLRRQ QLVRECPALA NVDPKQIKVW  60
FQNRRCREKQ RKESSRLQAL NRKLTAMNKL LMEENDRLQK QVSQLVYDHG RHGVAAAGMM  120
RRVPAFPPQA AAAAGHQLAT ATDTSCESVV TSGHHHQQQQ HNVVQPPPRD ASPAGLMSIA  180
EETLTEFLSK ATGTAVEWLQ MPGMKPGPDS IGIIAISHGC AGVAARACGL VGMEPAKVAE  240
ILKDRPLWLR DCRSMDVVNV LPAGANGTIE LLYMQARTHK PENSEPEPEI LKLKFVFDLQ  300
LYAPTTLAPA RDFWLLRYTS ILDDGSLVVC ERSLSSKQGG PSMPLVQPFI RGEMLPSGFL  360
IRPSDGGGSV IHIVDHMDLE PWSVPEVVRP LYESSAMVAQ KISMAALRYL RQVAHEDTRS  420
VITGWGRQPA ALRALSQKLT RGFNEALNGL ADDGWSVIES DGVDDVCISV NSSKVIGCNA  480
TFSSGLPIVS TGVLCAKASM LLQDVSPPSL LQFLREHRSQ WADSNLDAFF ASAMKPNFCN  540
LPMSRLGGFS GQVILPLAHT FEPEEVLSNS VLLLNYFDAT IYCFQFLEVI KLGNASNYQD  600
TLVHRDLFLL QMYNGVEESS AGTCSELIFA PIDASFSDDS PLLPSGFRII PIDSPLDTSS  660
PNCTLDLAST LEAATPRSRI SGVNGGGGGC AAAAASSSSK AVMTIAFQFA FDGHLQDSVA  720
AMARQYMRNI ISSVQRIAVA LSSSRLVPPG AAAAAAQLSP VTPEAATLPR WICQSYRFHF  780
GAELIKSVDA NSSNESILKA VWHHPSAILC CSLKAMPVFT FANQSGLDML ETTLVALQDM  840
TLEKVFDDQG RKNLCTELPN IMEQGMACME GGVCVSSVGR AASYEKAVAW KVVDGDGGGA  900
HCICFMFINW TFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52150.10.0HD-ZIP family protein