PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA01G07970.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family HD-ZIP
Protein Properties Length: 852aa    MW: 92182.6 Da    PI: 6.544
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA01G07970.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.89.2e-191270357
                     --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
         Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                     k  ++t+eq+e+Le+l++++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  ONIVA01G07970.1 12 KYVRYTPEQVEALERLYYECPKPSSLRRQQLVRECpalaNVDPKQIKVWFQNRRCREKQ 70
                     6789*****************************************************97 PP
2START138.95.1e-441793702204
                      HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTTEEEEEEE CS
            START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissggalqlmv 95 
                      +aee+++e+++ka+ ++  W +++ +++g++++ +++ s+++ g a+ra+g+v m++a  v+e+l+d++ W +++++++++             
  ONIVA01G07970.1 179 IAEETLTEFLSKATGTAVEWLQMPGMKPGPDSIGIIAISHGCAGVAARACGLVGMEPA-KVAEILKDRPLWLRDCRSMDVV------------- 258
                      789*******************************************************.8888888888*******88776............. PP

                      EXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHH CS
            START  96 aelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslv 185
                       +l+a+++l+p Rdf+ +Ry+  l +g++v++++S++s+q  p+    ++++R+e+lpSg+li+p+++g+s +++v+h+dl+ +++++++r+l+
  ONIVA01G07970.1 259 -NLYAPTTLAPaRDFWLLRYTSILDDGSLVVCERSLSSKQGGPSmplVQPFIRGEMLPSGFLIRPSDGGGSVIHIVDHMDLEPWSVPEVVRPLY 351
                      .799***************************************999999********************************************* PP

                      HHHHHHHHHHHHHHTXXXX CS
            START 186 ksglaegaktwvatlqrqc 204
                      +s+++ ++k+ +a+l++++
  ONIVA01G07970.1 352 ESSAMVAQKISMAALRYLR 370
                      ***************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 852 aa     Download sequence    
MVASAAAMDA SKYVRYTPEQ VEALERLYYE CPKPSSLRRQ QLVRECPALA NVDPKQIKVW  60
FQNRRCREKQ RKESSRLQAL NRKLTAMNKL LMEENDRLQK QVSQLVYDHG RHGVAAAGMM  120
RRVPAFPPQA AAAAGHQLAT ATDTSCESVV TSGHHHQQQQ HNVVQPPPRD ASPAGLMSIA  180
EETLTEFLSK ATGTAVEWLQ MPGMKPGPDS IGIIAISHGC AGVAARACGL VGMEPAKVAE  240
ILKDRPLWLR DCRSMDVVNL YAPTTLAPAR DFWLLRYTSI LDDGSLVVCE RSLSSKQGGP  300
SMPLVQPFIR GEMLPSGFLI RPSDGGGSVI HIVDHMDLEP WSVPEVVRPL YESSAMVAQK  360
ISMAALRYLR QVAHEDTRSV ITGWGRQPAA LRALSQKLTR GFNEALNGLA DDGWSVIESD  420
GVDDVCISVN SSKVIGCNAT FSSGLPIVST GVLCAKASML LQDVSPPSLL QFLREHRSQW  480
ADSNLDAFFA SAMKPNFCNL PMSRLGGFSG QVILPLAHTF EPEEFLEVIK LGNASNYQDT  540
LVHRDLFLLQ MYNGVEESSA GTCSELIFAP IDASFSDDSP LLPSGFRIIP IDSPLDTSSP  600
NCTLDLASTL EAATPRSRIS GVNGGGGGCA AAAASSSSKA VMTIAFQFAF DGHLQDSVAA  660
MARQYMRNII SSVQRIAVAL SSSRLVPPGA AAAAAQLSPV TPEAATLPRW ICQSYRFHFG  720
AELIKSVDAN SSNESILKAV WHHPSAILCC SLKAMPVFTF ANQSGLDMLE TTLVALQDMT  780
LEKVFDDQGR KNLCTELPNI MEQGMACMEG GVCVSSVGRA ASYEKAVAWK VVDGDGGGAH  840
CICFMFINWT FL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52150.10.0HD-ZIP family protein