PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA01G07860.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

WRKY

Protein Properties

Length: 618aa MW: 65403.1 Da PI: 7.7324

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA01G07860.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.3	2.1e-30	275	334	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a gCpv+k+v+r+a+d +++++tYeg+Hnh+ ONIVA01G07860.1 275 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVAaGCPVRKQVQRCADDMSILITTYEGTHNHP 334 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 618 aa Download sequence
MIKGDSKQLA SMYMKEEMIK GERQLGTHED RLKDEVIKDG DKISDGNFFK SLQNISSTKE 60 EVCSPGPIER SCMDSSLLNM KAQNKGQDDK LESTRAEMGE VREENERLKT LLSRISHDYR 120 SLQTHFYDVL QQGRAKKLPD SPATDIEEPE FVSLRLGTST SKCKKEDKST TSSEVKGSTE 180 DFLKIKGGLS LGLSDCRVDA NNSEKVQPDV MTLSPEGSFE DARDDTAETT EQWPPSKMLK 240 NLRSVGAEAE DDIAPQPQVK KARVSVRARC DAPTMNDGCQ WRKYGQKIAK GNPCPRAYYR 300 CTVAAGCPVR KQVQRCADDM SILITTYEGT HNHPLSVSAT AMASTTSAAA SMLISGSSST 360 SLAAYPAASP ALTFDASSKP PLIGGRPFFL PTAAAAAITS TPSYPTITLD LTSPAAAAAT 420 SSHAAFSLSN RFSHTRYPST GFTFSGSGPS TAPWPGYLSY GASLSAHPYN GGGGKSSSSF 480 EAALSSINGS RQQGGGSAPL YQMQQKAAAP PPPSVITDTI AKAITADPSF HTALAAAITS 540 YVGKKGSPPA TGGEDSKVGL KWGEHLGLGL THSSPSTATM AAVAASSSSQ MFLQPSLGLS 600 GSTTSASTSP VANREQAH

Sequence ? help Back to Top

Protein Sequence Length: 618 aa Download sequence

MIKGDSKQLA SMYMKEEMIK GERQLGTHED RLKDEVIKDG DKISDGNFFK SLQNISSTKE  60
EVCSPGPIER SCMDSSLLNM KAQNKGQDDK LESTRAEMGE VREENERLKT LLSRISHDYR  120
SLQTHFYDVL QQGRAKKLPD SPATDIEEPE FVSLRLGTST SKCKKEDKST TSSEVKGSTE  180
DFLKIKGGLS LGLSDCRVDA NNSEKVQPDV MTLSPEGSFE DARDDTAETT EQWPPSKMLK  240
NLRSVGAEAE DDIAPQPQVK KARVSVRARC DAPTMNDGCQ WRKYGQKIAK GNPCPRAYYR  300
CTVAAGCPVR KQVQRCADDM SILITTYEGT HNHPLSVSAT AMASTTSAAA SMLISGSSST  360
SLAAYPAASP ALTFDASSKP PLIGGRPFFL PTAAAAAITS TPSYPTITLD LTSPAAAAAT  420
SSHAAFSLSN RFSHTRYPST GFTFSGSGPS TAPWPGYLSY GASLSAHPYN GGGGKSSSSF  480
EAALSSINGS RQQGGGSAPL YQMQQKAAAP PPPSVITDTI AKAITADPSF HTALAAAITS  540
YVGKKGSPPA TGGEDSKVGL KWGEHLGLGL THSSPSTATM AAVAASSSSQ MFLQPSLGLS  600
GSTTSASTSP VANREQAH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	1e-64	WRKY family protein

Link Out ? help Back to Top
Ensembl	ONIVA01G07860.1