PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA01G07020.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | C2H2 | ||||||||
Protein Properties | Length: 518aa MW: 55665.4 Da PI: 9.1214 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 19.3 | 3e-06 | 74 | 96 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C++Cgk F r nL+ H r H ONIVA01G07020.3 74 YVCEICGKGFQRDQNLQLHRRGH 96 9********************88 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 518 aa Download sequence |
MMLKDLAEIQ QQQLLAAAEE NMSNLTSASG DQASVSSHPA PPPAKKKRSL PGNPDPEAEV 60 IALSPRTLMA TNRYVCEICG KGFQRDQNLQ LHRRGHNLPW KLKQRNPKEV VRKKVYVCPE 120 AGCVHHDPAR ALGDLTGIKK HFSRKHGEKK WKCDKCSKRY AVHSDWKAHS KHFCRKHGEK 180 KWKCDRCGKR YAVHSDWKAH SKVCGTREYR CDCGTLFSRR DSFITHRAFC DALAEESARA 240 VTAAAAVAGQ QQHGGGMLFS QVADVLDHQA AMAMGGHGLM QELCLKREQQ QQQQQFAPSW 300 LTAQQQQQQL EAMAGAGNPA AMYGSARLDQ EFIGSSTPES GGAQQAGLSF GFSSTSSAPP 360 HPAASSAHMS ATALLQKAAQ MGATLSRPSS HAHMAPVAAA STHNSSSSAA TTNAPPPPPT 420 SNVSSTCVGA GGYGLAFEAS HFIAADESSR GARSDRDTGN GVAGAGNDGL TRDFLGLRAF 480 SHGNIMSMAG FDPCMSTTSA SSAAPYDHHH HSNKPWHS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 101 | 114 | KLKQRNPKEVVRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13810.1 | 1e-97 | C2H2 family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA01G07020.3 |