PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA01G07020.2

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

C2H2

Protein Properties

Length: 536aa MW: 57662.8 Da PI: 9.2275

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA01G07020.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	19.3	3.2e-06	92	114	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C++Cgk F r nL+ H r H ONIVA01G07020.2 92 YVCEICGKGFQRDQNLQLHRRGH 114 9********************88 PP

Sequence ? help Back to Top
Protein Sequence Length: 536 aa Download sequence
MPVVTLQAAG RIQEKFVQMM LKDLAEIQQQ QLLAAAEENM SNLTSASGDQ ASVSSHPAPP 60 PAKKKRSLPG NPDPEAEVIA LSPRTLMATN RYVCEICGKG FQRDQNLQLH RRGHNLPWKL 120 KQRNPKEVVR KKVYVCPEAG CVHHDPARAL GDLTGIKKHF SRKHGEKKWK CDKCSKRYAV 180 HSDWKAHSKH FCRKHGEKKW KCDRCGKRYA VHSDWKAHSK VCGTREYRCD CGTLFSRRDS 240 FITHRAFCDA LAEESARAVT AAAAVAGQQQ HGGGMLFSQV ADVLDHQAAM AMGGHGLMQE 300 LCLKREQQQQ QQQFAPSWLT AQQQQQQLEA MAGAGNPAAM YGSARLDQEF IGSSTPESGG 360 AQQAGLSFGF SSTSSAPPHP AASSAHMSAT ALLQKAAQMG ATLSRPSSHA HMAPVAAAST 420 HNSSSSAATT NAPPPPPTSN VSSTCVGAGG YGLAFEASHF IAADESSRGA RSDRDTGNGV 480 AGAGNDGLTR DFLGLRAFSH GNIMSMAGFD PCMSTTSASS AAPYDHHHHS NKPWHS

Sequence ? help Back to Top

Protein Sequence Length: 536 aa Download sequence

MPVVTLQAAG RIQEKFVQMM LKDLAEIQQQ QLLAAAEENM SNLTSASGDQ ASVSSHPAPP  60
PAKKKRSLPG NPDPEAEVIA LSPRTLMATN RYVCEICGKG FQRDQNLQLH RRGHNLPWKL  120
KQRNPKEVVR KKVYVCPEAG CVHHDPARAL GDLTGIKKHF SRKHGEKKWK CDKCSKRYAV  180
HSDWKAHSKH FCRKHGEKKW KCDRCGKRYA VHSDWKAHSK VCGTREYRCD CGTLFSRRDS  240
FITHRAFCDA LAEESARAVT AAAAVAGQQQ HGGGMLFSQV ADVLDHQAAM AMGGHGLMQE  300
LCLKREQQQQ QQQFAPSWLT AQQQQQQLEA MAGAGNPAAM YGSARLDQEF IGSSTPESGG  360
AQQAGLSFGF SSTSSAPPHP AASSAHMSAT ALLQKAAQMG ATLSRPSSHA HMAPVAAAST  420
HNSSSSAATT NAPPPPPTSN VSSTCVGAGG YGLAFEASHF IAADESSRGA RSDRDTGNGV  480
AGAGNDGLTR DFLGLRAFSH GNIMSMAGFD PCMSTTSASS AAPYDHHHHS NKPWHS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	119	132	KLKQRNPKEVVRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13810.1	1e-97	C2H2 family protein

Link Out ? help Back to Top
Ensembl	ONIVA01G07020.2