PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA01G07020.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

C2H2

Protein Properties

Length: 518aa MW: 55665.4 Da PI: 9.1214

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA01G07020.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	19.3	3e-06	74	96	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C++Cgk F r nL+ H r H ONIVA01G07020.1 74 YVCEICGKGFQRDQNLQLHRRGH 96 9********************88 PP

Sequence ? help Back to Top
Protein Sequence Length: 518 aa Download sequence
MMLKDLAEIQ QQQLLAAAEE NMSNLTSASG DQASVSSHPA PPPAKKKRSL PGNPDPEAEV 60 IALSPRTLMA TNRYVCEICG KGFQRDQNLQ LHRRGHNLPW KLKQRNPKEV VRKKVYVCPE 120 AGCVHHDPAR ALGDLTGIKK HFSRKHGEKK WKCDKCSKRY AVHSDWKAHS KHFCRKHGEK 180 KWKCDRCGKR YAVHSDWKAH SKVCGTREYR CDCGTLFSRR DSFITHRAFC DALAEESARA 240 VTAAAAVAGQ QQHGGGMLFS QVADVLDHQA AMAMGGHGLM QELCLKREQQ QQQQQFAPSW 300 LTAQQQQQQL EAMAGAGNPA AMYGSARLDQ EFIGSSTPES GGAQQAGLSF GFSSTSSAPP 360 HPAASSAHMS ATALLQKAAQ MGATLSRPSS HAHMAPVAAA STHNSSSSAA TTNAPPPPPT 420 SNVSSTCVGA GGYGLAFEAS HFIAADESSR GARSDRDTGN GVAGAGNDGL TRDFLGLRAF 480 SHGNIMSMAG FDPCMSTTSA SSAAPYDHHH HSNKPWHS

Sequence ? help Back to Top

Protein Sequence Length: 518 aa Download sequence

MMLKDLAEIQ QQQLLAAAEE NMSNLTSASG DQASVSSHPA PPPAKKKRSL PGNPDPEAEV  60
IALSPRTLMA TNRYVCEICG KGFQRDQNLQ LHRRGHNLPW KLKQRNPKEV VRKKVYVCPE  120
AGCVHHDPAR ALGDLTGIKK HFSRKHGEKK WKCDKCSKRY AVHSDWKAHS KHFCRKHGEK  180
KWKCDRCGKR YAVHSDWKAH SKVCGTREYR CDCGTLFSRR DSFITHRAFC DALAEESARA  240
VTAAAAVAGQ QQHGGGMLFS QVADVLDHQA AMAMGGHGLM QELCLKREQQ QQQQQFAPSW  300
LTAQQQQQQL EAMAGAGNPA AMYGSARLDQ EFIGSSTPES GGAQQAGLSF GFSSTSSAPP  360
HPAASSAHMS ATALLQKAAQ MGATLSRPSS HAHMAPVAAA STHNSSSSAA TTNAPPPPPT  420
SNVSSTCVGA GGYGLAFEAS HFIAADESSR GARSDRDTGN GVAGAGNDGL TRDFLGLRAF  480
SHGNIMSMAG FDPCMSTTSA SSAAPYDHHH HSNKPWHS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	101	114	KLKQRNPKEVVRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13810.1	1e-97	C2H2 family protein

Link Out ? help Back to Top
Ensembl	ONIVA01G07020.1