PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA01G06350.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

WRKY

Protein Properties

Length: 509aa MW: 52194.3 Da PI: 6.8304

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA01G06350.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	93.8	1.3e-29	237	296	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a +Cpv+k+v+r+a+d +++++tYeg+H h+ ONIVA01G06350.1 237 MNDGCQWRKYGQKISKGNPCPRAYYRCTVApNCPVRKQVQRCADDMSILITTYEGTHSHP 296 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 509 aa Download sequence
MDVVVESPPV RDEKKVDVAA IGGAPPIVFE SFAPSTQRDS TIIKKEEKME AAKAEMGEVR 60 EENERLKTML TRIVSDYKSL HTHFLDVVKV KEQTAAELSG DDDDDEPDDL VSLSLCTRPN 120 AAAARRKGHE RTPSSGGGGD DGRLSLGLSC ARGGVASDDD DDKQASRRAL PPMPVLNLSS 180 DSSGDAAGAG AGEPTQPNKA SRSSSGGGDG ADDEVLQQQQ AKKARVSVRV KCDTPTMNDG 240 CQWRKYGQKI SKGNPCPRAY YRCTVAPNCP VRKQVQRCAD DMSILITTYE GTHSHPLPPA 300 AAAMASTTSA AAAMLTSGST TSTMHGGGGV HHHLPFASAV GGGGGVGLLG PTTISTATSC 360 PTVTLDLTAP HSLLHPSSAS PYAAAAAGYE SSRALPAAWS SGYLAYGGAA AAQPYYAKGV 420 APSPFGHHFG MMGMAAAAAA ARPAPEQLFG GQTTSPYLQR AIGGGGVAPA AVTDTIAKAI 480 TSDPSFQSVL AAAITSYMGR GGGAAAPNK

Sequence ? help Back to Top

Protein Sequence Length: 509 aa Download sequence

MDVVVESPPV RDEKKVDVAA IGGAPPIVFE SFAPSTQRDS TIIKKEEKME AAKAEMGEVR  60
EENERLKTML TRIVSDYKSL HTHFLDVVKV KEQTAAELSG DDDDDEPDDL VSLSLCTRPN  120
AAAARRKGHE RTPSSGGGGD DGRLSLGLSC ARGGVASDDD DDKQASRRAL PPMPVLNLSS  180
DSSGDAAGAG AGEPTQPNKA SRSSSGGGDG ADDEVLQQQQ AKKARVSVRV KCDTPTMNDG  240
CQWRKYGQKI SKGNPCPRAY YRCTVAPNCP VRKQVQRCAD DMSILITTYE GTHSHPLPPA  300
AAAMASTTSA AAAMLTSGST TSTMHGGGGV HHHLPFASAV GGGGGVGLLG PTTISTATSC  360
PTVTLDLTAP HSLLHPSSAS PYAAAAAGYE SSRALPAAWS SGYLAYGGAA AAQPYYAKGV  420
APSPFGHHFG MMGMAAAAAA ARPAPEQLFG GQTTSPYLQR AIGGGGVAPA AVTDTIAKAI  480
TSDPSFQSVL AAAITSYMGR GGGAAAPNK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	222	231	KKARVSVRVK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	3e-43	WRKY family protein

Link Out ? help Back to Top
Ensembl	ONIVA01G06350.1