PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA01G06130.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | NF-YC | ||||||||
Protein Properties | Length: 238aa MW: 25123.7 Da PI: 4.1791 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 45.4 | 1.7e-14 | 115 | 199 | 17 | 100 |
NF-YC 17 knhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtr.tdifdflvdivprde 100 ++ +lPl r+k+i+++d d+k+++ ea l++ a elf+ l+ + a rr+++ + aa + + dfl+d p e ONIVA01G06130.1 115 QRPALPLGRVKRIIRVDRDIKKVTNEAALLIAAATELFVGSLAAGAHRAASRRGRRAVRAVHVRAAAREhRPTADFLLDCLPAAE 199 5668***********************************************************98876515699*****999765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence |
MAAAAVADEV TEAMEQVEGE REEADAVADE AAEVMEQAEG EREEAIDAVA GEAGEVMKEV 60 VEGEREEANA MADEADEAME PEGEREEEAD AVADEATEPM EQVEGEGEDG DAATQRPALP 120 LGRVKRIIRV DRDIKKVTNE AALLIAAATE LFVGSLAAGA HRAASRRGRR AVRAVHVRAA 180 AREHRPTADF LLDCLPAAEE AAPARAAAAG PSRGGGRGEA KPLPCGTRRI DAFFQKTT |
Link Out ? help Back to Top | |
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Ensembl | ONIVA01G06130.1 |