PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA01G05610.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family G2-like
Protein Properties Length: 507aa    MW: 53016.7 Da    PI: 5.8625
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA01G05610.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like100.31.3e-31266321156
          G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                      k+r++W+peLH+rFv+a++ LGG+++AtPk+i+elmkv+gLt+++vkSHLQkYRl+
  ONIVA01G05610.1 266 KARRCWSPELHRRFVNALQILGGAQVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 321
                      68****************************************************97 PP
2Myb_DNA-binding414.3e-13268319148
                      TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r  W++e++ ++v+a + lGg    t+k I + m   g+t  ++ks++qky+
  ONIVA01G05610.1 268 RRCWSPELHRRFVNALQILGGAqvaTPKQIRELMKvDGLTNDEVKSHLQKYR 319
                      568*****************99*****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 507 aa     Download sequence    
MASSSSDLTL DDHHHLTAVA AASGQATQKL QEFLSRLEEE RLKIDAFKRE LPLCMQLLNH  60
AMEAYRQQLE AYQMGSQHGA AAAAAARAPL VLEEFIPVKN IGIDVVAADK AAAAAGGNSV  120
SSEKASWMVS AQLWNAPASA SAADTAAKGP QTPKEHSEHH PLDTSPKLIT ALDGGGGGGA  180
FLPFSKDNAM GDGSAAAAAA LPELALAPAE KAADAITIAA GEVDKKPYAH DNGVVARSRE  240
AQNGGKPPST PPDGQAVPPP PQPHRKARRC WSPELHRRFV NALQILGGAQ VATPKQIREL  300
MKVDGLTNDE VKSHLQKYRL HTRRPMPSPA PPTAATPQLV VLGGIWVPPE YATQAAGPAI  360
YGAHPATQPH YTAAVAAQEY YHHHHHHLQH HPAAAALVHH RAVAPPPPLP PQQQLAPPYS  420
AKSSASARLG SPDSDGRGSG GGGGAAASGA GRDMSESIEE EGEGEEREDD DDDDEMAATN  480
NAHAVDGDDD DDEINTTTTT SAGAINY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03500.14e-40G2-like family protein