PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA01G04110.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family MYB_related
Protein Properties Length: 291aa    MW: 32582.8 Da    PI: 6.5129
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA01G04110.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like20.69.9e-073077154
          G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54
                     kpr rW++e HerF++a+    G +    k+i e+++ k  t  +++SH QkY 
  ONIVA01G04110.1 30 KPRERWSEEEHERFLDALIMY-GRD---WKKIEEHVGTK--TTIQIRSHAQKYF 77
                     79*****************99.777...69****99988..8899********5 PP
2Myb_DNA-binding56.18.4e-183276147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     r rW++eE+e+++da  ++G + Wk+I +++g ++t  q++s+ qky
  ONIVA01G04110.1 32 RERWSEEEHERFLDALIMYGRD-WKKIEEHVG-TKTTIQIRSHAQKY 76
                     78******************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MDRNTNNNSN SSSSSEMPGK KARKPYTITK PRERWSEEEH ERFLDALIMY GRDWKKIEEH  60
VGTKTTIQIR SHAQKYFLKV QKMGLAAGLP PQYPRRRLVM QQQQSSPAGS SSVAAQAILH  120
GQPQCLPPHH NVAVQSSIDM QNLEWASTSG AAAWGDHHGL IEPTAAFDSF PGESSFMGAA  180
SFSNMSMDWT GTTSEMVTAS IVQDETIELP LSPDDMQFAQ VYRFIGDIFD PDSPCPVETH  240
LQKLKNMDVI TVKTILLVLR NLEDNLLSPQ FEPIRRLLST YDPNRGLSGH L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G09600.13e-51MYB_related family protein