PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM12G19660.3

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

bZIP

Protein Properties

Length: 299aa MW: 32069.5 Da PI: 6.5318

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM12G19660.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	52.4	1.2e-16	113	168	4	59
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 kr+rr+ +NRe+ArrsR+RK+a + Le v +L +eN +L+k+l+ +++++++ OGLUM12G19660.3 113 AKRTRRMLSNRESARRSRKRKQAHLNDLESQVSQLRSENASLQKRLSDMTQKYKQS 168 69*****************************************7777777776654 PP

Sequence ? help Back to Top
Protein Sequence Length: 299 aa Download sequence
MKRGGAGVGG GGGDPGAYAA VLKTKLDLYC AAVAKSMEAK PQESSLGYLN LQASDTSQLA 60 SQASFNGYGS TRVTNSNAIH EDYDQGKPAN SGTSKEQSDD DGDLEEDTDP VNAKRTRRML 120 SNRESARRSR KRKQAHLNDL ESQVSQLRSE NASLQKRLSD MTQKYKQSTT EYGNLQDDMN 180 AMRRKVNIAE EAVRRVTGIG LRLFTTSEMP ASSMPFSSGV SDAASAAAAA ALVEDDWTNC 240 SLPDEAIPVP SAAMALRSPS MRRVASLENL QKRIHAGDVT HFEAASALSL PEATACDNK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	127	133	RRSRKRK
2	127	134	RRSRKRKQ
3	129	134	SRKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28770.2	1e-25	bZIP family protein

Link Out ? help Back to Top
Ensembl	OGLUM12G19660.3