PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM12G19010.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 426aa    MW: 46608.7 Da    PI: 6.3975
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM12G19010.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_122.42.6e-07292333546
                      CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 
                      +r +r   NR +A++s ++K + + eL++k ++L++e ++L 
  OGLUM12G19010.1 292 RRVKRILNNRASATKSKEKKMKHVGELQRKLQVLQSETTTLG 333
                      5789999******************************99985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 426 aa     Download sequence    
MEGEPSRRLS LLDRCDDGSE DPVVPPRVPT ILNLASHHRL DRSKFLPLIH PDPARFISST  60
GSSFPPYSEP PPSAPMLEVG SGFGPEDLYS FFPNHFFSME SISLPPYDVV DVPPVIPLAL  120
RSGRSNQGLP SKLPLIEVHR RSHSDIPFGY SQEHPQMPPV ASVKPEVTTI EGHQLEDVVA  180
AALKDMGIQA WSPSGSIDKE VKSSGAGSTT HHCHSLSVDS FMMGNLNFGV VGQQMSSPPL  240
LTTEVNVGGG EPIGSTASPF AAELANVKFT EDEKKKIVMD KSLSEIVLTD PRRVKRILNN  300
RASATKSKEK KMKHVGELQR KLQVLQSETT TLGAQVTVMQ RNNNELVSQN NELKTRLQAM  360
DQLAQLGDAL TSRLAAEAQH LRAVVSEISD PNLPSGPHQQ LSSDMDQLQQ LLTQRQTSQI  420
QQNQPQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G21230.12e-42bZIP family protein