PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM12G18880.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | G2-like | ||||||||
Protein Properties | Length: 395aa MW: 41668.4 Da PI: 8.2378 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 101.5 | 5.5e-32 | 246 | 301 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rFv a+++LGG++ AtPk+i+elmkv+gLt+++vkSHLQkYRl+ OGLUM12G18880.1 246 KARRCWSPELHRRFVTALQRLGGPQAATPKQIRELMKVDGLTNDEVKSHLQKYRLH 301 68****************************************************97 PP | |||||||
2 | Myb_DNA-binding | 43.7 | 6.5e-14 | 248 | 299 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W++e++ ++v a ++lGg+ t+k I + m g+t ++ks++qky+ OGLUM12G18880.1 248 RRCWSPELHRRFVTALQRLGGPqaaTPKQIRELMKvDGLTNDEVKSHLQKYR 299 568************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 395 aa Download sequence |
MGSSSASAAQ REEEAAAAAF VLGGVDMRML AARTATGALA RAGGGEAAAA AAAARFEDCI 60 RSLEAEKAKM EVFRRELPIS VHLIADVIEW LKDEVEKQRL LRRRQVEAPA AAPPPEMFAP 120 PATAKRKSAA SAAAEGVKAE ADANDKRSWM SSAQLWSCGS HTSTSTNNGG SVKKQQHKVS 180 NAFMPLATLP AFAKSLEKAD AAVPDLSLSS RVAMADAPAC PAAPSTTSSA VTDVAVAQRQ 240 QAVQRKARRC WSPELHRRFV TALQRLGGPQ AATPKQIREL MKVDGLTNDE VKSHLQKYRL 300 HTRRASDSGG GGGDHQTVGG RLWPPPPEQY TTSQHSTSQS GSPQGPLQLT VSSNHAVSVT 360 AGDSCDGGEE EEEEDGKSGS YSWEMQNGAR ASSSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G03500.1 | 6e-30 | G2-like family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM12G18880.1 |