PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM12G12500.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family G2-like
Protein Properties Length: 210aa    MW: 22552.8 Da    PI: 6.3038
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM12G12500.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like54.82e-1779126156
          G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                      k+r++W+peLH+rFv  +++L G++         lmkv+gLt ++vkSHL kYRl+
  OGLUM12G12500.1  79 KARRCWSPELHRRFVATLQRLDGPQ--------GLMKVDGLTDDEVKSHLHKYRLH 126
                      68*******************9998........79*******************97 PP

2Myb_DNA-binding22.92e-0781124148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmg.kgRtlkqcksrwqkyl 48 
                      r  W++e++ ++v   ++l g+        m   g+t+ ++ks+++ky+
  OGLUM12G12500.1  81 RRCWSPELHRRFVATLQRLDGP-----QGLMKvDGLTDDEVKSHLHKYR 124
                      668*****************88.....55666669************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MSISNHHVSN AFMPLATSLV FAKSPEKAAT ATPLPAAVPD LSLSSPACPA APASVTSSAV  60
TDVARVQRRR QQQQAVQRKA RRCWSPELHR RFVATLQRLD GPQGLMKVDG LTDDEVKSHL  120
HKYRLHTRRA SDGGGDSGGL WTPPPEQYTT SQHNTSQSPA LTVSSSHAAS VTAGDSCDGG  180
EEEEEEEEDD GKSESYSWEM QNGARASLSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03500.13e-18G2-like family protein