PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM12G12500.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | G2-like | ||||||||
Protein Properties | Length: 210aa MW: 22552.8 Da PI: 6.3038 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 54.8 | 2e-17 | 79 | 126 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rFv +++L G++ lmkv+gLt ++vkSHL kYRl+ OGLUM12G12500.1 79 KARRCWSPELHRRFVATLQRLDGPQ--------GLMKVDGLTDDEVKSHLHKYRLH 126 68*******************9998........79*******************97 PP | |||||||
2 | Myb_DNA-binding | 22.9 | 2e-07 | 81 | 124 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.kgRtlkqcksrwqkyl 48 r W++e++ ++v ++l g+ m g+t+ ++ks+++ky+ OGLUM12G12500.1 81 RRCWSPELHRRFVATLQRLDGP-----QGLMKvDGLTDDEVKSHLHKYR 124 668*****************88.....55666669************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 210 aa Download sequence |
MSISNHHVSN AFMPLATSLV FAKSPEKAAT ATPLPAAVPD LSLSSPACPA APASVTSSAV 60 TDVARVQRRR QQQQAVQRKA RRCWSPELHR RFVATLQRLD GPQGLMKVDG LTDDEVKSHL 120 HKYRLHTRRA SDGGGDSGGL WTPPPEQYTT SQHNTSQSPA LTVSSSHAAS VTAGDSCDGG 180 EEEEEEEEDD GKSESYSWEM QNGARASLSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G03500.1 | 3e-18 | G2-like family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM12G12500.1 |