PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM12G10910.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 470aa    MW: 50872.6 Da    PI: 5.13
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM12G10910.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM69.87.4e-22101332128
              NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 
                        GfrF+P+ ee+v++yL + ++g++ + +e  i+++++y +eP++L +     +++++ + +f ++ ++ +    + +r++  g W ++ + k
  OGLUM12G10910.1  10 ELGFRFNPSPEEVVTYYLPRLIAGHPPKDTEScIHRANVYGAEPRELAAqfapVARSSNGDRFFLTECKRIK---GKVSRVAGGGSWVSQTS-K 99 
                      57***********************95554444**************8435543333333556666665543...5899999*****98765.9 PP

              NAM  91 evlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                      ++++++g +vg  k + f     ++g++tdW+m+ey+l
  OGLUM12G10910.1 100 DIKNREGIKVGEAKNFRFK----KDGTNTDWLMEEYHL 133
                      99999*************7....78999********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 470 aa     Download sequence    
MATNLHLLLE LGFRFNPSPE EVVTYYLPRL IAGHPPKDTE SCIHRANVYG AEPRELAAQF  60
APVARSSNGD RFFLTECKRI KGKVSRVAGG GSWVSQTSKD IKNREGIKVG EAKNFRFKKD  120
GTNTDWLMEE YHLCLRQASD LEPVLCRVYV SPRAAKDSAA HQESAALTPQ EPAPPLAHAP  180
APAPIQEPAA LPRQELAPAP PRLEAVITQQ QATMKMRGSV PASKAARQSC VTASAPPARR  240
VAPQPAPPSL RTAPAAVAPP RQVPVITQQQ APPLKRPAPP VPSPPCAKKI RGPVSASPAA  300
RQSCVAASAP PPWCVPPPPR PAPPSRRVMA PLPPYPMDPF ETPPSPHAPR HDPFEPPPSP  360
DPPIQSYAID PPIQSYAMDP FEQPPSPYAP HGVDDMDEFT RSLEAQLEEA DGDEIAAATV  420
APPMAQNVAP DDDMDEFTRS LEAQLEEADG DDKIDDDEID EEIFQIPLKD