PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM12G08090.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

bZIP

Protein Properties

Length: 477aa MW: 50399.1 Da PI: 7.6163

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM12G08090.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	68.4	1.1e-21	293	355	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkr+rrkq+NRe+ArrsR+RK+ae+eeL++++++L++eN +L++e+++++ke+++l s++ OGLUM12G08090.1 293 ERELKRQRRKQSNRESARRSRLRKQAECEELAQRAEVLKQENASLRDEVNRIRKEYDELLSKN 355 89**********************************************************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 477 aa Download sequence
MGSSGADAPT KTSKASAPQE QQPPASSSTA TPAVYPDWAN FQGYPPIPPH GFFPSPVASS 60 PQGHPYMWGA QPMIPPYGTP PPPYVMYPPG VYAHPSMPPG AHPFTPYAMA SPNGNADPTG 120 TTTTAAAAAG GETDGKSSEG KEKSPIKRSK GSLGSLNMIT GKNSTEHGKT SGASANGAIS 180 QSGESGSESS SEGSEANSQN DSHHKESGQE QDGEVRSSQN GVSRSPSQAK LNQTMAIMPM 240 TSSGPVPAPT TNLNIGMDYW ANTASSTPAI HGKATPTAAP GSMVPGEQWV QDERELKRQR 300 RKQSNRESAR RSRLRKQAEC EELAQRAEVL KQENASLRDE VNRIRKEYDE LLSKNSSLKE 360 KLEDKQHKTD EAGVDNKLQH SGCRDGLVAE LMLGKVSEDV SKDRFAPEAG PGAAVAGASL 420 MRSSNMSGAG MECLDRNSIT WLSGMVAVDS ILSLGIRKVV LCGIFSCTIL MSMTKVK

Sequence ? help Back to Top

Protein Sequence Length: 477 aa Download sequence

MGSSGADAPT KTSKASAPQE QQPPASSSTA TPAVYPDWAN FQGYPPIPPH GFFPSPVASS  60
PQGHPYMWGA QPMIPPYGTP PPPYVMYPPG VYAHPSMPPG AHPFTPYAMA SPNGNADPTG  120
TTTTAAAAAG GETDGKSSEG KEKSPIKRSK GSLGSLNMIT GKNSTEHGKT SGASANGAIS  180
QSGESGSESS SEGSEANSQN DSHHKESGQE QDGEVRSSQN GVSRSPSQAK LNQTMAIMPM  240
TSSGPVPAPT TNLNIGMDYW ANTASSTPAI HGKATPTAAP GSMVPGEQWV QDERELKRQR  300
RKQSNRESAR RSRLRKQAEC EELAQRAEVL KQENASLRDE VNRIRKEYDE LLSKNSSLKE  360
KLEDKQHKTD EAGVDNKLQH SGCRDGLVAE LMLGKVSEDV SKDRFAPEAG PGAAVAGASL  420
MRSSNMSGAG MECLDRNSIT WLSGMVAVDS ILSLGIRKVV LCGIFSCTIL MSMTKVK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	310	316	RRSRLRK
2	310	317	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32150.1	1e-85	bZIP family protein

Link Out ? help Back to Top
Ensembl	OGLUM12G08090.1