PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM12G07210.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | DBB | ||||||||
Protein Properties | Length: 214aa MW: 21968.2 Da PI: 4.7366 | ||||||||
Description | DBB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 20.1 | 1.3e-06 | 5 | 45 | 6 | 40 |
zf-B_box 6 CpeHeekelqlfCedCqqllCedClleeHkg......Htvv 40 C+ +e+ e+ C ++ lC+ C + H+ H +v OGLUM12G07210.1 5 CDACEQAEAAVLCCADEAALCRRCDAAVHSAnrlagkHPRV 45 *****************************656777777766 PP | |||||||
2 | zf-B_box | 24.7 | 5e-08 | 64 | 99 | 4 | 37 |
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg..H 37 ++C+ ++ek +fC +++ llC++C + H H OGLUM12G07210.1 64 PTCDICQEKTGYFFCLEDRALLCRSCDVDVHTAtaH 99 79**************************99955663 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 214 aa Download sequence |
MKIGCDACEQ AEAAVLCCAD EAALCRRCDA AVHSANRLAG KHPRVALLLP SSSSAAAGDD 60 DHHPTCDICQ EKTGYFFCLE DRALLCRSCD VDVHTATAHA AAHRRFLITG VRIGGSVDAA 120 AAADVIVSPT SSSIAPAGSA SSNHAVAGAG AAGNNNGRSP APVRFSGGDG GVEPEQQWPW 180 SDVFAADDDD DVSAAMEQCY YHGISEPHSS SLTG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G78600.1 | 1e-34 | DBB family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM12G07210.1 |