PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM12G02730.2

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

bZIP

Protein Properties

Length: 709aa MW: 77490.5 Da PI: 4.8489

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM12G02730.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	24.7	5.2e-08	569	605	14	50
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 14 ReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 ReA r++Rq+Kka +++Lee+vk L N++L k+l+ OGLUM12G02730.2 569 REAVRKYRQKKKAHTAHLEEEVKRLRVINQQLVKRLQ 605 9********************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 709 aa Download sequence
MPRRTDNAAS ANSVEPEKSE ECLEFDDDEE EEVEEEEIEY EEIEEEIEEE EVEEDEDVVE 60 EVEEVDEEED EEEEEESDET EGVSKTKGVH QKDVTEKGKH AELLALPPHG SEVYVGGISS 120 DVSSEDLKRL CEPVGEVVEV RMMRGKDDSR GYAFVNFRTK GLALKAVKEL NNAKLKGKRI 180 RVSSSQAKNK LFIGNVPHSW TDDDFRKVVE EVGPGVLKAD LMKVSSANRN RGYGFVEYYN 240 HACAEYARQE MSSPTFKLDS NAPTVSWADP KNNDSASTSQ VKSVYVKNLP KNVTQAQLKR 300 LFEHHGEIEK VVLPPSRGGH DNRYGFVHFK DRSMAMRALQ NTERYELDGQ VLDCSLAKPP 360 AADKKDDRVP LPSSNGAPLL PSYPPLGYGI MSVPGAYGAA PASTAQPMLY APRAPPGAAM 420 VPMMLPDGRL VYVVQQPGGQ LPLASPPPQQ AGHRSGSGGR HGGSGGRYGG GGGSSGSSRP 480 EECVSETRLY MRILPVSQSA ESDGALYRQF TPVSHMDYEI SGPESEVDSE STPIHATTLT 540 PVSSAQMMIV VEVTKPSQRR AASHWATARE AVRKYRQKKK AHTAHLEEEV KRLRVINQQL 600 VKRLQGQAAL EVEVVRLRSL LVDVRSRING ALGSCPIQAQ CGVDNVLGCD GMAQCFAGKP 660 ELGVRQSCAP STVNCHISSD SGQNLVVPHA LSPSDVIGSF MVSSTSKDE

Sequence ? help Back to Top

Protein Sequence Length: 709 aa Download sequence

MPRRTDNAAS ANSVEPEKSE ECLEFDDDEE EEVEEEEIEY EEIEEEIEEE EVEEDEDVVE  60
EVEEVDEEED EEEEEESDET EGVSKTKGVH QKDVTEKGKH AELLALPPHG SEVYVGGISS  120
DVSSEDLKRL CEPVGEVVEV RMMRGKDDSR GYAFVNFRTK GLALKAVKEL NNAKLKGKRI  180
RVSSSQAKNK LFIGNVPHSW TDDDFRKVVE EVGPGVLKAD LMKVSSANRN RGYGFVEYYN  240
HACAEYARQE MSSPTFKLDS NAPTVSWADP KNNDSASTSQ VKSVYVKNLP KNVTQAQLKR  300
LFEHHGEIEK VVLPPSRGGH DNRYGFVHFK DRSMAMRALQ NTERYELDGQ VLDCSLAKPP  360
AADKKDDRVP LPSSNGAPLL PSYPPLGYGI MSVPGAYGAA PASTAQPMLY APRAPPGAAM  420
VPMMLPDGRL VYVVQQPGGQ LPLASPPPQQ AGHRSGSGGR HGGSGGRYGG GGGSSGSSRP  480
EECVSETRLY MRILPVSQSA ESDGALYRQF TPVSHMDYEI SGPESEVDSE STPIHATTLT  540
PVSSAQMMIV VEVTKPSQRR AASHWATARE AVRKYRQKKK AHTAHLEEEV KRLRVINQQL  600
VKRLQGQAAL EVEVVRLRSL LVDVRSRING ALGSCPIQAQ CGVDNVLGCD GMAQCFAGKP  660
ELGVRQSCAP STVNCHISSD SGQNLVVPHA LSPSDVIGSF MVSSTSKDE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	465	473	GGRYGGGGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35040.1	3e-15	bZIP family protein

Link Out ? help Back to Top
Ensembl	OGLUM12G02730.2