PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM11G14240.2
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 285aa    MW: 31366.5 Da    PI: 7.0553
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM11G14240.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM102.46.2e-32271499128
              NAM   9 PtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.....kg 97 
                      Pt+ +lvv+yL++++ ++++++ ++i++vdi++++Pwd+   ++++++  yfF++++++   ++r+nra+ +g+W+  g++ ++++k     ++
  OGLUM11G14240.2  27 PTNADLVVHYLHRRAIQEPVPC-DFITNVDILQHNPWDIV-PAEEKTNGKYFFIHEENERLGNHRSNRAAGDGFWRPAGSEVPIYHKrsggaDE 118
                      9*********************.99**************5.455677899************************************98877777 PP

              NAM  98 elvglkktLvfykgrapkgektdWvmheyrl 128
                      +lvg+k+tLvf+ g+++++++t+Wvm+e+rl
  OGLUM11G14240.2 119 ALVGMKRTLVFHYGNSSSAKRTEWVMQEFRL 149
                      77***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MQEVLERRMA SPGVCINLVN GTSTRLPTNA DLVVHYLHRR AIQEPVPCDF ITNVDILQHN  60
PWDIVPAEEK TNGKYFFIHE ENERLGNHRS NRAAGDGFWR PAGSEVPIYH KRSGGADEAL  120
VGMKRTLVFH YGNSSSAKRT EWVMQEFRLA GATLIPCPVT RPATGDGSML PCHRTGTTIA  180
TENNGSPSAG QTHGPLEKTM VEPDSSLRIC RIYKKRQRTP QFIIPPSIGD ARELILALPT  240
IGNTRKVALA LPAIDFLGQP SFEEGSDVSA DVITDDKDGY GHGMN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10480.11e-24NAC family protein