PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM11G08660.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | Nin-like | ||||||||
Protein Properties | Length: 864aa MW: 95298.9 Da PI: 6.0243 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 92.7 | 2.7e-29 | 532 | 582 | 2 | 52 |
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek++sl++l++yFs+++kdAAk++gvc+T+LKriCRq+GI+RWP+Rkik++ OGLUM11G08660.1 532 EKSVSLSVLQQYFSGSLKDAAKSIGVCPTTLKRICRQHGISRWPSRKIKKV 582 799**********************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 864 aa Download sequence |
MDGGGTPDGD PVPDMDMLML SSALDGLDSY TDLVAGSSVA DSIFSALTCF PPSQERLLHV 60 STAVGSSSRQ DDADVSITEE GTTRTRSDRA AGLASGEPVA VGIGSVPKPF DGVTLTERML 120 RALAMLKEAS GGEAILVQVW MPVRNGEQHV LTTSDQPFLL DQKLTGYREV SRQFTFSAEE 180 GPGLFPGLPG RVFMSGMPEW TSNVMYYHGS EYLRVDYATR HEVRGSLAMP VFNSSGGSCC 240 AVLEVVMTRE KDNFCLEMVN VSNALQSYSR DQKLALMEIF DVLQAVCQAH LLPLALAWIP 300 VCSKRDVLVS IEYGAKFGKR NKEVLCIEES ACYVNDTRVR DFVQVCAEHP LEKGQGVAGN 360 AYLSNNPFFS SDVKDYDMHA YPLVNHARKF GLHAAVAIRL RSTYTKNDDY VLEFFLPVLC 420 KGGEEQQLLL DSISATMRKV CKSLRTVSDA ELKEDVTRKP SNENRSGTRC PSPVNLIYSG 480 REIDVSNETK TNTPLEYQIE GIDEQLSDTK STNKLIKCSN ASDGEKRRSS TEKSVSLSVL 540 QQYFSGSLKD AAKSIGVCPT TLKRICRQHG ISRWPSRKIK KVNRSLKKIQ NVISSVHGVE 600 GVLKYDPSTG CLISSVSPSI EPVLMNVEHK GQDVLHKLQN KQNGEINFDM DDGELFRNSH 660 STRTLSGAFC EDMSNGLYVA REMTCVAKTG TRTERLEHKP SSRDSFSAPQ EYRMESETDK 720 SNKNSKQSLP SSSSMTDCST SSGETFKSIK SQSANESNTT VVVKASYKND TIRFKLLPSM 780 KYEQLLEEIA KRLKLSVGVF QIKYKDDEGD WVILASDADL QECLEILDTT RLHILKLQVQ 840 DVVCPIGSSS ERCGFGSTVI DLFI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G59580.1 | 1e-175 | Nin-like family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM11G08660.1 |